Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02081 ATGGGAAAGTTCATTTTGAGTACTGGTCTTATATTGTTTGTGGTGTTATTCACTACTGAACTTGGAGTAGCATCAGCTGTTTGGCAGCGAGCTCATGCAACTTTCTATGGTGGGAGTGATGCCTCAGGAACAATGGGAGGTGCATGTGGCTATGGAAATCTCTACACAGATGGTTATGGCACAAAAACAGCTGCCCTGAGCACTGTTTTGTTTAATGATGGAAAATCATGCGGTGGTTGCTATAGGATAGTTTGTGACGCAAGCCAAGTGCCCCAATGGTGCCTCAGGGGCACTTCCATCGATATTACTGCCACAAATTTCTGCCCCCCAAACCTCGCACTTCCTAATGACAATGGCGGTTGGTGTAATCCCCCTAGACCACACTTTGACATGTCTCAACCTGCCTTTCAGACAATAGCCAAGTACAAAGCTGGAATTGTACCAATCTTGTACATGAAAGTTGGGTGCAAAAGAAGTGGAGGCATCAGATTTACCATCAATGGAAGGGACTATTTCGAATTGGTGCTTATAAGCAACGTAGGTGGAGCTGGAGAGATTTCCCGAGTTTGGGTTAAAGGGTCCAGAATGAATAATTGGGAATCCATGACGAGGAATTGGGGTGCTAACTGGCAAAGCTTAAGATATGTGAATGGTCAGAGTTTGTCTTTCAGAGTTCAACTCCGCAATGGGAAGACTCGCACGGCAAATAATGTAGCACCGTCCAATTGGAGATTTGGCCAGTCTTTCTCCAGCAATGTTCAGTTCTGA 768 0.4531 MGKFILSTGLILFVVLFTTELGVASAVWQRAHATFYGGSDASGTMGGACGYGNLYTDGYGTKTAALSTVLFNDGKSCGGCYRIVCDASQVPQWCLRGTSIDITATNFCPPNLALPNDNGGWCNPPRPHFDMSQPAFQTIAKYKAGIVPILYMKVGCKRSGGIRFTINGRDYFELVLISNVGGAGEISRVWVKGSRMNNWESMTRNWGANWQSLRYVNGQSLSFRVQLRNGKTRTANNVAPSNWRFGQSFSSNVQF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02081 255 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Gma03g02081 255 PRINTS Expansin/Lol pI family signature 45 63 IPR007118 GO:0005576
Gma03g02081 255 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Gma03g02081 255 PRINTS Expansin/Lol pI family signature 144 160 IPR007118 GO:0005576
Gma03g02081 255 PRINTS Expansin/Lol pI family signature 199 213 IPR007118 GO:0005576
Gma03g02081 255 PRINTS Expansin/Lol pI family signature 237 251 IPR007118 GO:0005576
Gma03g02081 255 PRINTS Expansin signature 58 72 IPR002963 GO:0009664
Gma03g02081 255 PRINTS Expansin signature 87 98 IPR002963 GO:0009664
Gma03g02081 255 PRINTS Expansin signature 100 110 IPR002963 GO:0009664
Gma03g02081 255 PRINTS Expansin signature 119 136 IPR002963 GO:0009664
Gma03g02081 255 PRINTS Expansin signature 136 149 IPR002963 GO:0009664
Gma03g02081 255 PRINTS Expansin signature 160 172 IPR002963 GO:0009664
Gma03g02081 255 PRINTS Expansin signature 172 193 IPR002963 GO:0009664
Gma03g02081 255 PRINTS Expansin signature 208 229 IPR002963 GO:0009664
Gma03g02081 255 PRINTS Expansin signature 237 253 IPR002963 GO:0009664
Gma03g02081 255 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 161 IPR007112 -
Gma03g02081 255 SUPERFAMILY PHL pollen allergen 158 251 IPR036749 -
Gma03g02081 255 SMART dpbb_1 63 151 IPR007112 -
Gma03g02081 255 Pfam Expansin C-terminal domain 162 240 IPR007117 -
Gma03g02081 255 Gene3D - 161 255 IPR036749 -
Gma03g02081 255 SUPERFAMILY Barwin-like endoglucanases 21 179 IPR036908 -
Gma03g02081 255 Gene3D - 18 157 IPR036908 -
Gma03g02081 255 PANTHER EXPANSIN-A15 7 255 IPR002963 GO:0009664
Gma03g02081 255 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 171 251 IPR007117 -
Gma03g02081 255 Pfam Lytic transglycolase 63 151 IPR009009 -
Gma03g02081 255 PANTHER EXPANSIN 7 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02081 Gma-Chr3 46357645 46359623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02081 11 255 Expansin Gene Family AT4G01630 75.918 8.11e-145 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02081 - - gmx:100777045 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02081 03 46357645 46359623 Gma03g02081 03 46357645 46359623 ECH
Gma19g02118 19 50066865 50068282 Gma03g02081 03 46357645 46359623 GST
Gma03g02081 03 46357645 46359623 Gma10g01389 10 40714049 40715237 PCT
Gma03g02081 03 46357645 46359623 Gma20g00882 20 35134841 35136420 PCT
Gma10g01389 10 40714049 40715237 Gma03g02081 03 46357645 46359623 PCT
Gma20g00882 20 35134841 35136420 Gma03g02081 03 46357645 46359623 PCT