Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02074 ATGGGAAGGCACTCTTGCTGTTACAAACAGAAACTTAGGAAGGGTCTTTGGTCACCAGAAGAAGATGAAAAACTTTTGAGGCATATCACTAAGTACGGTCATGGATGTTGGAGCTCAGTTCCTAAGCAAGCAGGTTTGCAGAGGTGCGGCAAAAGCTGCAGGCTTAGGTGGATCAATTATTTAAGGCCTGATTTGAAGAGAGGTACATTTTCACAAGAGGAGGAAAATCTCATCATTGAACTTCATGCAGTGCTAGGGAACAGATGGTCTCAAATTGCAGCACAATTGCCAGGGAGGACTGACAATGAAATAAAGAATCTGTGGAATTCTTGCTTAAAGAAGAAACTCAGGCAAAGAGGAATAGACCCTGTGACACATAAGCCACTGTCAGAGGTTGAGAATGGAGAGGAGGGCAAAACGAGGAGCCAAGAATTATCCAATGAACTAAACCTCCTGAATTCAGAGAGCTTCAAGTCAGATGAAGGGTCCTATGAGCAGAGAGCATCATCAATTGCCCCCAAAGCCTATGAGATGGAAGGCTCTTGCAGCTCCAAGATTAACAACACCAAAAACGACACCAACTTGATGTCCAATTGTTCCAACAAAGACATGTTCCTAGACAGCTACACCACTAGTTGCCAACCCTCAGATTTGATGGGAAATTACCCTCTTCATATCACTGACACTCTCCCAACCAATTCAAACTCTTGCCATTGGTTCAGCCAAACTGCAAGACCCTTTGATATAAACTCAAACTCTGAGTTTACAATTACTTCCAATGTTATGTCCATTCTTCCACCTACAACAACCTCATTCCTCCCAAGTACTTCTTTTTGCTACAAGTCATCACTTGGTGTCCCTTCAGAAGATATTTCAGCACCCTCTTTTGGATTGAATGGTCCCAGTTACTGGGAAGCAAGTGCCTCCAACAAGAGCAATGGAAGCAACAACACGAGTGATGGCAGCAGAGAGTTGACAACTACAAGTAGCAAGAACAGTGTGCTCTCTTCTTGGGAATTGACAGAAGAAGCAAAGTGGTCTGAGTACCTCCACAACCCAATGTTAATGCTGGCAGCTCCTGAATCATTGTGCAACCAAATTAGGCCAGCCACACATTTGATACCTGATAACACTTTAGGGGCAATAATATTGCCTGATTCCAAGAATcaacaacaacaacaacaacaacaacaGTCTCAAAATTCTTGCATCTTCTCCAAGGACGTGCAGAAGCTAACAGCAGCATTTGGACATATATAG 1260 0.4254 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPVTHKPLSEVENGEEGKTRSQELSNELNLLNSESFKSDEGSYEQRASSIAPKAYEMEGSCSSKINNTKNDTNLMSNCSNKDMFLDSYTTSCQPSDLMGNYPLHITDTLPTNSNSCHWFSQTARPFDINSNSEFTITSNVMSILPPTTTSFLPSTSFCYKSSLGVPSEDISAPSFGLNGPSYWEASASNKSNGSNNTSDGSRELTTTSSKNSVLSSWELTEEAKWSEYLHNPMLMLAAPESLCNQIRPATHLIPDNTLGAIILPDSKNQQQQQQQQQSQNSCIFSKDVQKLTAAFGHI 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02074 419 MobiDBLite consensus disorder prediction 122 144 - -
Gma03g02074 419 MobiDBLite consensus disorder prediction 308 328 - -
Gma03g02074 419 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gma03g02074 419 CDD SANT 17 61 IPR001005 -
Gma03g02074 419 SMART sant 13 63 IPR001005 -
Gma03g02074 419 SMART sant 66 114 IPR001005 -
Gma03g02074 419 PANTHER MYB DOMAIN PROTEIN 55 1 396 - -
Gma03g02074 419 Gene3D - 11 67 - -
Gma03g02074 419 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gma03g02074 419 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Gma03g02074 419 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gma03g02074 419 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gma03g02074 419 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gma03g02074 419 MobiDBLite consensus disorder prediction 122 143 - -
Gma03g02074 419 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Gma03g02074 419 CDD SANT 69 109 IPR001005 -
Gma03g02074 419 PANTHER MYB DOMAIN PROTEIN 55 1 396 - -
Gma03g02074 419 Gene3D - 69 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02074 Gma-Chr3 46300639 46302596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02074 1 156 MYB Transcription Factor Family AT4G01680 84.615 9.12e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma03g02074 Myb_DNA-binding 2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02074 K09422 - gmx:100819449 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02111 19 50002787 50004533 Gma03g02074 03 46300639 46302596 GST
Gma03g02074 03 46300639 46302596 Gma10g01379 10 40636448 40638184 PCT
Gma03g02074 03 46300639 46302596 Gma02g00062 02 733767 735765 PCT
Gma10g01379 10 40636448 40638184 Gma03g02074 03 46300639 46302596 PCT
Gma02g00062 02 733767 735765 Gma03g02074 03 46300639 46302596 PCT