Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02070 ATGGACAACCGACACCACCACCGTGAATTCACCTTCTTAAGCTCCGCCCACTTCCTCGATCACATAGATCCTCCTTCTATCAAAGAAATGGATTTCTTCTCAACTTCATCGCCTCGTGATCATAAAAATAACACTAGTAGCCGTGATACCAATGATGATCATTATCAGAATCGTGATGATCAACATGACACTCATGATCGCCATGGATCACCAACACGCGTCATTGATCACCGTGTAAACACTGGACTCAATTTAACTTGTGCAAGCGCTGGAGTGACAAAAGCTGAAAATGGTGAAAATCCTGAAACTGAGTTGAGTTCTCTTGAAAGTGAATTGCTGAGACTACAAGAAGAGAATAACAAGTTAAGAAATGTGCTGGACCATATTACCAAAAGCTATACCCAACTACAGGCTCAGTTGTTCATCGCCTTGCAAAACCTTCCTCAGAATATGGAAACAAAAATTGTGGACCCAGGAACAAGCAGAAAGTTAGACGTGGTCAATGATGCATCGGTTTCGGATGAAAAGACTGATCAAGATGTATCGGTTTCTCGTTCAAACAACGCGGAGGTAATGTCAAAGACACATGATCATGATGACCCTCAATTGACTAAACTATTGAATCTTGGAAAGCAGGCTTGTCCTGATGCTGCAGAAGATGTTCTTGACCGGTCCTCTTCACAGAGGTGGGGCTCATCCAAGTTAGAAGAACAACCCAAAACTACTGCAGAACAACTTGCTGCAGATCAGATTCCTCTCAGAAAAGCCAGGGTTTCCGTACGTGCTAGATCAGAAGCTCCCATGATTAGCGATGGATGTCAGTGGAGGAAATATGGACAAAAAATGGCCAAGGGTAACCCTTGCCCTCGTGCTTACTATCGCTGCACTATGGCTGTAGGATGCCCAGTCCGCAAACAGGTTCAAAGAAGTGCAGATGACAAAACAGTGTTGATAACAAGCTACGAAGGCAATCACAACCACCCTCTGCCGCCAGCCGCCACCGCCATGGCAAATACTACATCAGCAGCTGCAGCCATGCTGCTATCAGGTTCAGCAGCAAGCAAGGAATCGCTAACAAACTCTGCAGGATATTACTCTTCTACAATTCCCTATGCTTCAATGGCAACCCTATCAGCTTCAGCTCCATTCCCAACCATCACTCTCGACTTGACCCAAAACCCCAACAACGCCGCCATGCAGCTGCACCGAGTACCACCAGGCCATGGCGGCGCCACGTTCCCTCTGCCACTGCATGCGGCAGCATCTGGTGGTCCCCACCTTCTAGGGCACCCCTTGTTCTTCCAACAGAAGCTGCTTCCACCGCAAGCATTAATGCCCCTTCTTCAACGACAACCTTCGTCGATGGTCGAAACGGTGAGTGCAGCCATTGCTTCTGATCCGAACTTCACTGCAGCTTTGGCAGCAGCAATCTCATCAATCATTGGAGTACCAAGAGGAGGCAATGACGGTAACAACAACAACAGTGGAAGTGGTGCTATTCCAGGTTCACCGCAGCTTCCTCAATCATGCACTACTTTCTCCACCAACTAG 1551 0.4739 MDNRHHHREFTFLSSAHFLDHIDPPSIKEMDFFSTSSPRDHKNNTSSRDTNDDHYQNRDDQHDTHDRHGSPTRVIDHRVNTGLNLTCASAGVTKAENGENPETELSSLESELLRLQEENNKLRNVLDHITKSYTQLQAQLFIALQNLPQNMETKIVDPGTSRKLDVVNDASVSDEKTDQDVSVSRSNNAEVMSKTHDHDDPQLTKLLNLGKQACPDAAEDVLDRSSSQRWGSSKLEEQPKTTAEQLAADQIPLRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRSADDKTVLITSYEGNHNHPLPPAATAMANTTSAAAAMLLSGSAASKESLTNSAGYYSSTIPYASMATLSASAPFPTITLDLTQNPNNAAMQLHRVPPGHGGATFPLPLHAAASGGPHLLGHPLFFQQKLLPPQALMPLLQRQPSSMVETVSAAIASDPNFTAALAAAISSIIGVPRGGNDGNNNNSGSGAIPGSPQLPQSCTTFSTN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02070 516 MobiDBLite consensus disorder prediction 42 74 - -
Gma03g02070 516 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 23 516 IPR044810 GO:0003700
Gma03g02070 516 SUPERFAMILY WRKY DNA-binding domain 262 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g02070 516 Coils Coil 105 139 - -
Gma03g02070 516 MobiDBLite consensus disorder prediction 225 243 - -
Gma03g02070 516 MobiDBLite consensus disorder prediction 222 243 - -
Gma03g02070 516 SMART WRKY_cls 269 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g02070 516 Pfam WRKY DNA -binding domain 271 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g02070 516 MobiDBLite consensus disorder prediction 488 516 - -
Gma03g02070 516 MobiDBLite consensus disorder prediction 29 74 - -
Gma03g02070 516 ProSiteProfiles WRKY domain profile. 264 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g02070 516 Gene3D WRKY domain 254 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g02070 516 MobiDBLite consensus disorder prediction 170 201 - -
Gma03g02070 516 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 23 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02070 Gma-Chr3 46239635 46243933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02070 8 516 WRKY Transcription Factor Family AT4G01720 43.208 2.74e-83 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma03g02070 WRKY 6.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02070 - - gmx:100817839 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02106 19 49913147 49917653 Gma03g02070 03 46239635 46243933 GST
Gma03g02070 03 46239635 46243933 Gma10g01372 10 40526044 40530492 PCT
Gma03g02070 03 46239635 46243933 Gma02g00068 02 798178 802059 PCT
Gma10g01372 10 40526044 40530492 Gma03g02070 03 46239635 46243933 PCT
Gma02g00068 02 798178 802059 Gma03g02070 03 46239635 46243933 PCT