Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02065 ATGAGGCATGAGAATGGCCTGCAAGATGAAGAGCTTAAACATGATGAGAGGACAGAACAAGAGAGCAGCACAAAGGTGGAAAAGAGAGAAAAGAGACAACAAAAAGAAAAGGTTGAAACAGTTCCTTATCATAAGCTGTTCTTATTTGCTGACTCCACTGACATCATTTTGGTGGTTGTTGGCACCATTGGGGCCATTGGAAATGGTCTTGGGATGCCTCTCATGACATTGCTGTTCGGGGAACTGATTGATAGCTTTGGCAATAACCAATTTGGCTCCGACGTTGTCAAACAAGTTTCCAAGGTCTGTCTGAAATTTGTATACTTAGGAATAGGCACCGGTTTAGCTGCTTTCCTCCAAGTGACTTGCTGGACGGTCACAGGAGAAAGACAGGCTGCAAGAATAAGGGGCTTGTATTTGAAAACTATACTAAGACAGGATATTGCTTTCTTTGATAAGGAAACTAACACCGGAGAAGTGATAGGGAGGATGTCAGGTGACACTCTTCTCATACAAGATGCCATGGGTGAGAAGGTTGGGAGATTTCTGCAGCTAGTAGCAACATTCTTTGGGGGCTTTGTGATAGCATTTATCAAAGGATGGCTTCTAACTGTTGTCATGTTATCCGTTGTTCCACTTGTTGCTGCTGCAGGGGCTACTATGGCCTTTATCATAGGAATGATGGCAACTCGAGGTCAAAGCGCATATGCAAAAGCTTCACATGTAGTTGAAGAGACAATAGGTTCAATAAGAACTGTTGCATCCTTTACGGGAGAAAAGCAAGCAGTGTCTAGTTACAAGAAATTTCTTGCAGATGCTTATCAATCAGGAGTTCATGAAGGTTTCGTTGGTGGAATGGGTCTTGGCGTAGTTATGTTAGTTATGTTCTGTGGATATGCTTTGTCTGTATGGTTTGGTGCAAAGATGATAATGGAAAAAGGATATAGTGCGGGTGCAGTGGTCAATGTGTTTGTTGCTGTGTTAAATGCTTCCATGTCTCTTGGCCAGGCATCTCCTTCCATTAGTGCTTTTGCTGCAGGTCAAGCAGCAGCTTATAAAATGTTTCAGACAATTGAGAGAAAGCCAGAGATAGATGCTTATGACCCAAACGGAAAAATATTAGAGGATATTCACGGTGAAATTCATTTAAGGGATGTTTATTTCAGTTATCCAGCCAGACCTGAGGAGTTGATATTCAATGGATTCTCTCTTCATATACCTAGTGGCACTACTGCAGCTTTAGTAGGACAAAGTGGAAGTGGGAAGTCAACAGTTATCAGTTTAATTGAAAGATTCTATGATCCACAGGCAGGTGAAGTTCTTATTGATGGAACTAATGTAAAAGAGTTTCAGCTAAGATGGATCAGAGGAAAAATTGGCCTTGTCAGCCAGGAGCCAGTGTTGTTTGCATCTAGCATTAAGGATAATATTGCTTATGGAAAAGAGGGAGCGATGGTTGAAGAGATAAGAGCTGCAGCAGAACTTGCAAATGCTGCTAAATTCATTGACAAACTGCCACAGGGATTGGACACAATGGTTGGTGAGCATGGAACTCAACTATCAGGTGGACAGAAGCAGCGCATTGCCATTGCAAGAGCAATCCTGAAAGATCCAAGAATTCTACTTCTAGATGAAGCAACAAGTGCACTTGATGCAGAGTCAGAAAGAATAGTACAAGAAGCTCTAGACAGGATCATGGTCAACAGAACTACTGTTATTGTTGCACATCGTCTGAGCACAGTGAGAAATGCCGATATGATCGCGGTAATTCATAGAGGGAAAATGGTTGAGAAAGGAACACACGTAGAATTAACCAAGGATCCTGAGGGTGCTTACTCTCAACTTATACATCTGCAAGAGGGAAACAAGGAATCAGAAGAAACAAGAGACAATCAAAACAAGAGGGAACTTTCCTCAGAATCCTTTACAAAGTTGAGTCAAAGGCGGTCACTTCGAAGATCAGGATCATCTATGGGGAACAGTAGCCGCCACTCTTTTTCAGTTTCATTTGGTTTACCTATAGGAGTTAACATCCCTGATCCTGAACTTGAATACTCACAGCCTCAAGAAAAATCACCAGAAGTTCCACTCCGGCGCCTTGCTTCCCTCAACAAGCCAGAGATTCCAGTGCTTCTGATTGGATGTGTAGCTGCCATAGCAAATGGTACCATATTTCCAATATTTGGCGTGCTGCTCTCCAGTGTTATCAAAACATTTTTTAAACCATTTCCTGAGATGAAAAAGGATTCCAAGTTTTGGGCACTCATGTTTGTGACCCTTGGATTTGGATCTTTACTGGCAATTCCAGCCCGAAGTTACTTTTTCGCTATGGCTGGCAGTAAGTTAATCCGACGTATCAGGCTCATTTGTTTTGAGAAGGTGATCAACATGGAGGTTGGTTGGTTCGATGAGCCTGAACACTCGAGTGGTGCAATTGGTGCAAGGCTCTCAGCAGATGCTGCATCCGTGCGTGCCCTTGTTGGTGATGCTTTAGGTCTATTGGTTCAAAACATAGCAACAGCATTGGCAGGTTTGATTATTGCTTTCGTTGCGAGCTGGCAATTGGCATTTATTCTTCTTGTCTTGGTTCCCCTCATTGGAATAAATGGTTACATTCAAATGAAATTCATGAAGGGATCCAATGCAGATGCAAAGATGATGTATGAGGAAGCAAGCCAAGTTGCTAATGATGCAGTTGGAAGCATAAGAACAGTAGCTTCTTTCTGTGCTGAGGAGAAAGTTATGGAACTATACAGGAAGAAATGCGAAGGTCCCATGCAAGCGGGGATACGACAAGGCTTGATAAGTGGAACAGGATTTGGAGTTTCATTTTTCTTGCTCTTCAGTGTCTATGCAACCAATTTCTATGCTGGAGCCAGATTTGTGGAAGCTGGCAAGGCATCATTCACAGATGTTTTTAGGGTTTTCTTTGCTTTAACTATGGCATCTATTGGAATTTCCCAATCAAGCTCCCTTGCTCCTGATTCTAACAAAGCCAAGATAGCCACTGCTTCCATATTCAGTATAATTGATGGGAAATCGAAGATAGATCCAAGTGATGAGTTTGGTGACACGGTGGATAGTGTAAAAGGAGAAATACAGATTCGACATGTAAGTTTTAAGTATCCATCTAGACCAGATATACAAATTTTTCGAGACTTAAGCTTGACTATCCATTCAGGCAAGACGGTGGCCCTTGTTGGTGAAAGTGGGAGTGGGAAATCCACAGTGATTGCCTTGTTACAGAGATTTTATGATCCTGATTCTGGTCAAATTACACTTGATGGGATAGAAATTCAGAATTTAAAACTCAAGTGGTTGAGGCAGCAGATGGGACTTGTAAGCCAAGAGCCAGTCTTGTTCAATGCCACCATTCGTGCCAATATTGCATATGGAAAGAAAGGTAATGAAACTGAAGCAGAAATCATAACTGCAGCAAAACTAGCCAATGCACATGGGTTTATTAGTGGTTTACAACAGGGTTATGATACAGTAGTGGGAGAAAGGGGAATCCAACTATCTGGTGGGCAGAAACAAAGGGTGGCCATTGCACGTGCAATAATTAAAAGTCCAAAGATATTGCTACTGGATGAGGCCACAAGTGCACTAGATGCTGAGTCAGAGAGAGTTGTTCAAGATGCCTTAGACAAAGTGATGGTGAGCAGGACCACTGTGGTTGTGGCTCATCGTTTATCTACAATAAAAAATGCAGATGTGATTGCAGTGGTAAAAAATGGAGTAATAGTCGAGAAAGGGAGGCATGAGACACTCATTAACATCAAGGATGGATTTTATGCTTCATTGGTCCAACTTCATACAAGTGCTACAACAGCATGA 3837 0.4217 MRHENGLQDEELKHDERTEQESSTKVEKREKRQQKEKVETVPYHKLFLFADSTDIILVVVGTIGAIGNGLGMPLMTLLFGELIDSFGNNQFGSDVVKQVSKVCLKFVYLGIGTGLAAFLQVTCWTVTGERQAARIRGLYLKTILRQDIAFFDKETNTGEVIGRMSGDTLLIQDAMGEKVGRFLQLVATFFGGFVIAFIKGWLLTVVMLSVVPLVAAAGATMAFIIGMMATRGQSAYAKASHVVEETIGSIRTVASFTGEKQAVSSYKKFLADAYQSGVHEGFVGGMGLGVVMLVMFCGYALSVWFGAKMIMEKGYSAGAVVNVFVAVLNASMSLGQASPSISAFAAGQAAAYKMFQTIERKPEIDAYDPNGKILEDIHGEIHLRDVYFSYPARPEELIFNGFSLHIPSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGTNVKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEGAMVEEIRAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKMVEKGTHVELTKDPEGAYSQLIHLQEGNKESEETRDNQNKRELSSESFTKLSQRRSLRRSGSSMGNSSRHSFSVSFGLPIGVNIPDPELEYSQPQEKSPEVPLRRLASLNKPEIPVLLIGCVAAIANGTIFPIFGVLLSSVIKTFFKPFPEMKKDSKFWALMFVTLGFGSLLAIPARSYFFAMAGSKLIRRIRLICFEKVINMEVGWFDEPEHSSGAIGARLSADAASVRALVGDALGLLVQNIATALAGLIIAFVASWQLAFILLVLVPLIGINGYIQMKFMKGSNADAKMMYEEASQVANDAVGSIRTVASFCAEEKVMELYRKKCEGPMQAGIRQGLISGTGFGVSFFLLFSVYATNFYAGARFVEAGKASFTDVFRVFFALTMASIGISQSSSLAPDSNKAKIATASIFSIIDGKSKIDPSDEFGDTVDSVKGEIQIRHVSFKYPSRPDIQIFRDLSLTIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGQITLDGIEIQNLKLKWLRQQMGLVSQEPVLFNATIRANIAYGKKGNETEAEIITAAKLANAHGFISGLQQGYDTVVGERGIQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVSRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLINIKDGFYASLVQLHTSATTA 1278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02065 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 619 IPR027417 -
Gma03g02065 1278 Gene3D - 1023 1277 IPR027417 -
Gma03g02065 1278 MobiDBLite consensus disorder prediction 619 664 - -
Gma03g02065 1278 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 59 346 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma03g02065 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1028 1271 IPR027417 -
Gma03g02065 1278 ProSitePatterns ABC transporters family signature. 1173 1187 IPR017871 GO:0005524
Gma03g02065 1278 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 381 617 IPR003439 GO:0005524
Gma03g02065 1278 CDD ABC_MTABC3_MDL1_MDL2 1033 1271 - -
Gma03g02065 1278 Pfam ABC transporter 1052 1201 IPR003439 GO:0005524
Gma03g02065 1278 Pfam ABC transporter 400 548 IPR003439 GO:0005524
Gma03g02065 1278 MobiDBLite consensus disorder prediction 620 637 - -
Gma03g02065 1278 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 712 998 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma03g02065 1278 Gene3D - 379 636 IPR027417 -
Gma03g02065 1278 SMART AAA_5 1060 1253 IPR003593 -
Gma03g02065 1278 SMART AAA_5 408 600 IPR003593 -
Gma03g02065 1278 CDD ABC_MTABC3_MDL1_MDL2 381 619 - -
Gma03g02065 1278 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1033 1270 IPR003439 GO:0005524
Gma03g02065 1278 SUPERFAMILY ABC transporter transmembrane region 693 1013 IPR036640 GO:0005524|GO:0016021
Gma03g02065 1278 PANTHER - 28 1274 - -
Gma03g02065 1278 CDD ABC_6TM_Pgp_ABCB1_D2_like 701 1016 - -
Gma03g02065 1278 Gene3D ABC transporter type 1, transmembrane domain 103 1007 IPR036640 GO:0005524|GO:0016021
Gma03g02065 1278 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 28 1274 - -
Gma03g02065 1278 MobiDBLite consensus disorder prediction 638 664 - -
Gma03g02065 1278 Pfam ABC transporter transmembrane region 711 982 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma03g02065 1278 Pfam ABC transporter transmembrane region 59 332 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma03g02065 1278 SUPERFAMILY ABC transporter transmembrane region 45 365 IPR036640 GO:0005524|GO:0016021
Gma03g02065 1278 ProSitePatterns ABC transporters family signature. 520 534 IPR017871 GO:0005524
Gma03g02065 1278 CDD ABC_6TM_Pgp_ABCB1_D1_like 59 342 - -
Gma03g02065 1278 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02065 Gma-Chr3 46183441 46188869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02065 34 1272 Calmodulin-binding Proteins AT2G36910 43.496 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02065 K05658 - gmx:100802547 2374.74