Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02063 ATGGAAGACGAGCCATTTCTTCTCACTACTACCACTTCCCAACCCATCACCGATTTTCTTCTTCCTTCTTCCAAGTCCTTCAACGACGTCACCACCACCACACGCGCGCGTGACGCCGCCGCCCAGGAGATTCAATCCGAACAACAACAACCTCCCAAGAAGAAAAAACTGAGTCGCTGCAAGACAGCACCTGCGATGGTGACCATGCGAGACCTCAAACCTAAGACACCCCAACTCCCCAAACCTCAAACCAGTTCCATTATACGACAAGGCATTTGGTTACTCGCCATGTACCTCTCCATAGGAGTCGCCATATACTCCTTCAACAGGGACCGTTTTTCCGGCATCGAAACACACCCCGTCGTCGACGCCCTTTACTTTTGCATAGTCACCATGTGCACCATAGGTTACGGAGACATAGCGCCGTTAACCCCATTCACCAAAATCTTTGCTTGCGCTTTTGTCTTGGTGGGGTTTGGGTTCATAGACATACTCCTCAGCGGGCTTGTTAACTTCGTTCTGGATTTGCAAGAGAACATGATCCTCACGGGGCTACAAATGGGTGCGAGTGATCAAAGGGAAGGTTTTTCTGCTAGGAATTACATCGTTGACGTGGCGAAGGGGAGGATGAGGATCAGGTTGAAGGTTGGTTTGGCGCTTGGGGTTGTGGTGCTGTGTATTGGGATTGGGGGTTTGGTTTTGTACTTTGTTGAAGGGTTGGATTGGGTTGATTCTATTTACTTGTCGGTTATGTCTGTCACAACGGTTGGGTATGGGGACCGAGCTTTTAAGACTCTTCCTGGTCGGTTATTTGCAGCTATTTGGTTGCTATTTTCTACTCTCATGGTGGCTCGGGCTTTTCTCTATTTGGCTGAGGCTAGAATCGATAGAAGGCATCGGAGAATGGCTAAGAAGGTTTTGCATAGGGAAATTACAGTTGAGGATTTGCTTGCTGCTGATATCAACAACACTGGTTTCATCAGcaagtcagagtatgtaatcttcaagctgaaagagatggTGCTCGTTCAATTTTTTGGTGCTAATGCCTCTGCAGTACTTTGCAAAGACAAAATGTTTGGAAAGACAATACTAGTACTAGTTATTCTGAGTGGTGGAGATGTGGTCGTCCTCGTGGAACAAGACGAGGAACTGAACATGGCAATATATTAA 1173 0.4587 MEDEPFLLTTTTSQPITDFLLPSSKSFNDVTTTTRARDAAAQEIQSEQQQPPKKKKLSRCKTAPAMVTMRDLKPKTPQLPKPQTSSIIRQGIWLLAMYLSIGVAIYSFNRDRFSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPFTKIFACAFVLVGFGFIDILLSGLVNFVLDLQENMILTGLQMGASDQREGFSARNYIVDVAKGRMRIRLKVGLALGVVVLCIGIGGLVLYFVEGLDWVDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLMVARAFLYLAEARIDRRHRRMAKKVLHREITVEDLLAADINNTGFISKSEYVIFKLKEMVLVQFFGANASAVLCKDKMFGKTILVLVILSGGDVVVLVEQDEELNMAIY 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02063 390 PRINTS Two pore domain K+ channel signature 254 263 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gma03g02063 390 PRINTS Two pore domain K+ channel signature 130 158 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gma03g02063 390 SUPERFAMILY Voltage-gated potassium channels 83 173 - -
Gma03g02063 390 Pfam Ion channel 94 173 IPR013099 -
Gma03g02063 390 Pfam Ion channel 223 292 IPR013099 -
Gma03g02063 390 MobiDBLite consensus disorder prediction 31 57 - -
Gma03g02063 390 Gene3D - 198 319 - -
Gma03g02063 390 Gene3D - 68 189 - -
Gma03g02063 390 PANTHER TWO-PORE POTASSIUM CHANNEL 4-RELATED 38 341 - -
Gma03g02063 390 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 38 341 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gma03g02063 390 ProSitePatterns EF-hand calcium-binding domain. 320 332 IPR018247 -
Gma03g02063 390 MobiDBLite consensus disorder prediction 31 48 - -
Gma03g02063 390 SUPERFAMILY Voltage-gated potassium channels 207 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02063 Gma-Chr3 46167040 46171158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02063 53 340 Ion Channels AT4G01840 70.990 7.65e-147 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02063 K05389 - gmx:100801488 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02100 19 49851624 49860193 Gma03g02063 03 46167040 46171158 GST