Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02053 ATGGATGACTGTTGTGCCGTTTGCGCTGAGCCTTTGGAATGGGTTGCGTACGGACCCTGTTTGCACCGGGAGGTGTGTTCCACGTGCGTCGCTCGTCTCCGTTTCATCTGCGACGATCGCCGTTGCTGCATCTGCAAGACCGAATGCAACCTCGTTTTCGTCACCAAGGCTCTAGGTGATTATACGAGGATGATCAATGATTTTTCGACCCTTCCTTTGGAGGCGAGGGAGGGCAAGGTTGGATCATATTGGTACCATGAGGATACAAATGCATTTTTTGATGATGTGGACCATTACAGGATGATCAAGGCTATGTGCAGGCTTTCGTGCAATGTATGTGACAAGATTGAGGATCAACCACATGATGCTGCTTCAAGGCGGCGAGCAAAGTTTAGGAATATAGGGCAGTTGAAGGGTCATTTATTCCACCGTCATAAGTTGCATATGTGCAATTTGTGTTTAGAAGGAAGGAAGGTTTTTATATGTGAGCAAAAACTATATACCAAAGCACAGTTGAATCAACACGTAATCTCAGGTGATTCTGAGGTGGATGGAAGTGAGAGTGAGAGAGGCGGTTTCATGGGGCATCCCATGTGTGAATTCTGCAGAACCCCATTTTATGGAGACAATGAATTATACATGCATATGTCTACAGAACATTATACTTGTCATATATGCCAAAGGCAGCATCCAGGGCAGTATGAGTACTATAAGAATTATGATGACCTAGAGATTCACTTCCGTCAAGAGCACTTCTTATGTGAAGATGAGGCTTGCCTGGCTAAGAAATTTGTTGTTTTTCAATCTGAAGCAGAGATGAAGAGGCATAATGCTATTGAACATGGAGGGCGGATGTCACGGTCTAAGCGTAATGCTGCTCTTCAGATACCAACAAGCTTCCGATACAGACATGGTAATGAACATGAGCAACGCCGCGGAAGAGGTCGTACGTTTCGTCGTGATACTGAAAATCAACTTTCTATGGCCATTGAAGCTAGTTTGGAAACAGCTAATGCAGAGCAAACATTTCTTGATCAATCGACATCAAGTAGTGGGCAAGTTGCCGTTGATGATGGGAATGATGATATTGATGCTCTCATTCAGCCATTTGAATCATTAGCTGCAGGTTCTGAAGCATCTGCAAGATACCTTCAAGCCTTGGGGCATAGCTCTAGGAATGGACCTCTGGAAGATTCTTCCTTTCCACCACTACCCATAATTTCCAGCAATGGCCAACAAAGGTCCAAACATGAACTGGAAGGTTCATCTAGTAACACTATGGCTGCACGTCTGCGTCGGCATGGCAACAGAACTGTATCTGTTATCAATTCTGGTAATGCTTGGCCAGCAGCAGGTCGTGGACTGGTACAGTCATCAAGTAATCCTTCACAATCTAAACTTTCAACAAATAATGTCCTTGGACTGTCTCGTAACACTGGGCAGATGAAAACAGTAATTAACAGTGGACCGTCATCATCAACTTATGCTGGTTCTATTCAGGCTACACAGAGAACTGCTCATGGACAATTTCCTGCTGGTTCATCGAGGAACACACGTGACAATGTAAGAATTGTTCACTCTGCATCTGCTCCAAATCTCATGGAGAACAATTCTGTTGAAGTTTCAATTTCTGATTTTCCTCCAGTTTCTGCTGCACAAATTCGTGGTGCTCTTGATTTTGATGAAGAAAGATACAGTATATTTAAAGACATATCTGCCCAATATCGCCAAGGCACAATAGATACAGGTACATATCTGGACTATGTACAGCAGTTTGGCTTGTCTCATCTTGTTCTTGAGTTGGCAAGACTATGCCCGGATACTCACAAACAGAAAGAGCTTGTTGAGGCTTACAACGCAAGTTTGCAAAGAGATGCTTTCCCAGAAATTAACTTGGTTCGAGGCAGCACTAGCACCCATTCCAAAGACAGTAACGTAAACAAGAAAGGTAAAGGTAAGTCTGTAGATAGTAGGGGGAGTAACTCCAGAGAGAAATTAGCAAATAACTTTTTAAGCACTGTACATCAGCTACAGGCAAATTATAAATCTTCAGAAGAGAAAGCGGAGGTGCTATCAAGGGGTGATTACCGCAGTGACGGAGGCAAATTAAAAATCGAGCAGCGGATTGATATGAATTCTGGTAGTCAACCTACGATGAAGCTTGGTGGGAAGACTGAAACATCAAACGACAGTTTATCTAATCAAAGTAAAGACGATGGGGGTGGTGGGAACAAGCAACGCAAGAAAACTTCTAAGTTCCTGAGAGTACGCCTTGGTGATGGTTCTGTTTCAGCCCTTCTTGATCAATCAGATCCTGGAACAACAGACGGCTCAGAAGGTAACAAGGATGACTCTGGAGGAGGGCCTCCTGTGCGAGGTGTTTGGCGAAAAGGGGGAGGCCAGACACTAGTCCATGTCAGCCTTAAACCCTACCTCACTGCCACTGCATTGTTGAAGGAGCTAAATGGAATCGGTGAACGGAACAATGACGGTGGAGGACCAACGGTTAGCCGAATGGCGCATGCACCGTGGCCCCTACCTCGGCGACATCTCAGCTCTCTGTTTTCTTCACTTTCCCAATCTCTCTCTTCCTTTTCTGCTCGTAGCCGAATTGGTCACTACATAGCAACATTCTTGGCTGAGCTCAGGGGACTGGGGAGTGCTAAAGGATCTTGA 2676 0.4488 MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDDRRCCICKTECNLVFVTKALGDYTRMINDFSTLPLEAREGKVGSYWYHEDTNAFFDDVDHYRMIKAMCRLSCNVCDKIEDQPHDAASRRRAKFRNIGQLKGHLFHRHKLHMCNLCLEGRKVFICEQKLYTKAQLNQHVISGDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELYMHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRQEHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPTSFRYRHGNEHEQRRGRGRTFRRDTENQLSMAIEASLETANAEQTFLDQSTSSSGQVAVDDGNDDIDALIQPFESLAAGSEASARYLQALGHSSRNGPLEDSSFPPLPIISSNGQQRSKHELEGSSSNTMAARLRRHGNRTVSVINSGNAWPAAGRGLVQSSSNPSQSKLSTNNVLGLSRNTGQMKTVINSGPSSSTYAGSIQATQRTAHGQFPAGSSRNTRDNVRIVHSASAPNLMENNSVEVSISDFPPVSAAQIRGALDFDEERYSIFKDISAQYRQGTIDTGTYLDYVQQFGLSHLVLELARLCPDTHKQKELVEAYNASLQRDAFPEINLVRGSTSTHSKDSNVNKKGKGKSVDSRGSNSREKLANNFLSTVHQLQANYKSSEEKAEVLSRGDYRSDGGKLKIEQRIDMNSGSQPTMKLGGKTETSNDSLSNQSKDDGGGGNKQRKKTSKFLRVRLGDGSVSALLDQSDPGTTDGSEGNKDDSGGGPPVRGVWRKGGGQTLVHVSLKPYLTATALLKELNGIGERNNDGGGPTVSRMAHAPWPLPRRHLSSLFSSLSQSLSSFSARSRIGHYIATFLAELRGLGSAKGS 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02053 891 MobiDBLite consensus disorder prediction 686 706 - -
Gma03g02053 891 MobiDBLite consensus disorder prediction 392 424 - -
Gma03g02053 891 CDD RING-HC_ZNF598 5 46 IPR041888 -
Gma03g02053 891 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Gma03g02053 891 MobiDBLite consensus disorder prediction 682 793 - -
Gma03g02053 891 MobiDBLite consensus disorder prediction 644 660 - -
Gma03g02053 891 PANTHER ZINC FINGER PROTEIN 598 1 803 IPR044288 GO:0061630|GO:0072344
Gma03g02053 891 MobiDBLite consensus disorder prediction 767 781 - -
Gma03g02053 891 MobiDBLite consensus disorder prediction 709 740 - -
Gma03g02053 891 MobiDBLite consensus disorder prediction 634 662 - -
Gma03g02053 891 MobiDBLite consensus disorder prediction 491 517 - -
Gma03g02053 891 PANTHER EBR1 1 803 - -
Gma03g02053 891 SMART c2h2final6 108 145 IPR013087 -
Gma03g02053 891 SMART c2h2final6 221 251 IPR013087 -
Gma03g02053 891 SMART c2h2final6 197 220 IPR013087 -
Gma03g02053 891 SMART c2h2final6 252 281 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02053 Gma-Chr3 46104341 46110225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02053 1 800 C2H2 Transcription Factor Family AT3G62240 51.228 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02053 K22381 - gmx:100799878 1594.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02053 03 46104341 46110225 Gma03g02053 03 46104341 46110225 ECH
Gma19g02092 19 49783693 49788281 Gma03g02053 03 46104341 46110225 GST