Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02040 ATGGACGCGAAGGATATCCTGGGATTGCCCAAAAACTCGTTCCCATCTCTCGAGAAGAAATCTCGTCCTCCCAAAGAGTCTCAAAGAAAACCAGATGGCATTTCGCGCGAGGTGTATGCGCTTACGGGCGGATTGGCCTCTCTCATGCCTGCAATTGAAGCCTCTCAGTTGAAGAAAAAGCCTCTTCCTCTCGAAAAAATCACTTGGCAGTGGCTTCCTTTCACCAGTTCTGCTCGTAAAGATAATCTTCATCTTTACCATTGGGTACGAGTCATCAATGGTGTTCCTCCTACGGGGGACTATTCTTTTGCCAAGTATAATAAGTCCGTTGATGTTATCAAATACACAGATGAGGAGTATGACAAGTATTTGTCAGATCCTACGTGGACCAAAGAGGAGACAGATCAACTATTTGACTTGTGTGAGAGATTTGATCTCCGATTTATTGTAATAGCTGATAGGTTTCCATCATCTCGGACTGTAGAGGAATTAAAGGATAGATATTATAGTGTTTCCCGGGCTATATTGATTGCTAGGGCTCCATCTTCTGGAGATGTTGTGGCACATTCTATTGTTAAGGAACCGTATAATGTTGCACAAGAAATGGAGCGAAAAAGAGCACTGTCCATGGTCCTCTCTCAAACAAGGCAACAAGAACGAAGAGATGAAGAGGTTCTTGTTGAAGCAAAAAAAATAGCTGAAAAACGCCTACCTCCCAAGGTTGCTGGACAGTCTCAGTTTGTTGCTTCTAATGCTGGTGCAGAAGCTATAGAGAGGGCTGTCCCTGGTGAAACCGTATCTCCATCAAATGTGCAACTTCCAATGGTTGCTCCAGATAATGCATCTACTCTGGCTTCTCTTCGCATGCTTCGTGTATATTTGAGAACATATGCACTTGAGCAAATGGTGCAAGCTGGGAATGCATCAGCTGGACTTCGGACTATCAAACGGGTTGAGCAAACTTTGCAAGATCTTGGGGTCAATTTGAAACCAAGGGTTCCAACGAAAGCTGTTTGTGCAGAGCATCTTGAATTAAGAAAAGAAATACTAACATGGCTTAATCTCCAGAAACAGGTGCAATATAAAGAGGCTGAAGGTTCCTCCTTTCGTGATGGGTCATATGGTGAAACACCTGGCACACCAAAGCATTTACATCGTGGTGGGGATCAGGATCGAACATTTATTCCAGATTCAATGAATTTCGGAGTGGAAAGGGTAGGCAAAAAGGACCAAAAGCGCAAGGCACCTGGAGCTCCATCAGCTCATAAAAGACCTAGAAAACTAAAGGCCTCAGATCTTTAG 1302 0.4386 MDAKDILGLPKNSFPSLEKKSRPPKESQRKPDGISREVYALTGGLASLMPAIEASQLKKKPLPLEKITWQWLPFTSSARKDNLHLYHWVRVINGVPPTGDYSFAKYNKSVDVIKYTDEEYDKYLSDPTWTKEETDQLFDLCERFDLRFIVIADRFPSSRTVEELKDRYYSVSRAILIARAPSSGDVVAHSIVKEPYNVAQEMERKRALSMVLSQTRQQERRDEEVLVEAKKIAEKRLPPKVAGQSQFVASNAGAEAIERAVPGETVSPSNVQLPMVAPDNASTLASLRMLRVYLRTYALEQMVQAGNASAGLRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRKEILTWLNLQKQVQYKEAEGSSFRDGSYGETPGTPKHLHRGGDQDRTFIPDSMNFGVERVGKKDQKRKAPGAPSAHKRPRKLKASDL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02040 433 MobiDBLite consensus disorder prediction 18 33 - -
Gma03g02040 433 MobiDBLite consensus disorder prediction 364 433 - -
Gma03g02040 433 Gene3D - 98 184 - -
Gma03g02040 433 MobiDBLite consensus disorder prediction 403 417 - -
Gma03g02040 433 PANTHER BNAA04G26950D PROTEIN 2 433 - -
Gma03g02040 433 CDD SANT_DMAP1_like 129 171 - -
Gma03g02040 433 Pfam SANT/Myb-like domain of DAMP1 101 175 IPR032563 -
Gma03g02040 433 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 2 433 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Gma03g02040 433 SUPERFAMILY Homeodomain-like 126 172 IPR009057 -
Gma03g02040 433 SMART sant 125 174 IPR001005 -
Gma03g02040 433 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02040 Gma-Chr3 45978964 45985558 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma03g02040 SANT_DAMP1_like 3.4e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02040 K11324 - gmx:100808220 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02040 03 45978964 45985558 Gma03g02040 03 45978964 45985558 ECH
Gma19g02077 19 49666536 49673124 Gma03g02040 03 45978964 45985558 GST