Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02033 ATGGAGAATACTAAGATGATGGGGGTGAAGATACAGGACTATGCTTCTAATATGGAGAGTAATAATTATCCATTCTTTGATTTCTCTGAAGATAAGGGCTCTTTAGGGTTTATGGAGCTATTGGGTGCGCAAGACTATAGTCCTCTCCTTGATTTCCCTCTATCGTCACACGTGTCAGGGCCTCAAACCTCTTCTGTTAAGGAACCACCTGAGACTAAGAAAGAGTGTTCCGAGGTAACTAATAACAACCAGCAACCTGCGACTCCGAACTCTTCATCCATTTCCTCCGCGTCCAGTGAGGTTTTCTATGATGAACAGAATAAAACTGTAGATCAAGCACCTGAACACCAAAAGACAAAGGAACAGTTGAAGGCTAAGAAGACAAATCAGAAGAGACAGAGAGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGATACAGATGGAGAAAGTACGGTCAAAAAGCTGTGAAAAACAGCCCCTTTCCCAGGAGCTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAACGTGTGGAGCGATCTTTTAGCGACCCAAGCATTGTGGTGACAACCTACGAAGGACAACACACGCATCCAAGCCCAGTTATGGGTCGCTCCAACAACTTTGGTTCGGTAATTATGTCTGGATCTGCTGGAAACTACATGTCCCAATATTATCAGCAGCAGCATCAACAAGTCCACATCGATGCATTGTCCTCTTTGGGTTTCCTCTCTTCTTCGTCTTCAAGGAATGCCACTTTTCCTCAAGAGACTGCCTTGTTAAGTGACTATGGGCTTCTTCAAGATGTTGTTTCTTCACATATGTTGAAAGAAGATTAG 864 0.4387 MENTKMMGVKIQDYASNMESNNYPFFDFSEDKGSLGFMELLGAQDYSPLLDFPLSSHVSGPQTSSVKEPPETKKECSEVTNNNQQPATPNSSSISSASSEVFYDEQNKTVDQAPEHQKTKEQLKAKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFSDPSIVVTTYEGQHTHPSPVMGRSNNFGSVIMSGSAGNYMSQYYQQQHQQVHIDALSSLGFLSSSSSRNATFPQETALLSDYGLLQDVVSSHMLKED 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02033 287 ProSiteProfiles WRKY domain profile. 144 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g02033 287 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 24 270 IPR044810 GO:0003700
Gma03g02033 287 SMART WRKY_cls 149 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g02033 287 MobiDBLite consensus disorder prediction 109 134 - -
Gma03g02033 287 PANTHER WRKY TRANSCRIPTION FACTOR 24 270 - -
Gma03g02033 287 SUPERFAMILY WRKY DNA-binding domain 141 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g02033 287 Pfam WRKY DNA -binding domain 150 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g02033 287 PIRSF WRKY_txn_fact_IIc 1 287 IPR017396 GO:0003700
Gma03g02033 287 Gene3D WRKY domain 133 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g02033 287 Coils Coil 113 133 - -
Gma03g02033 287 MobiDBLite consensus disorder prediction 76 106 - -
Gma03g02033 287 MobiDBLite consensus disorder prediction 56 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02033 Gma-Chr3 45929063 45930996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02033 26 287 WRKY Transcription Factor Family AT2G47260 47.352 1.05e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma03g02033 WRKY 1.7e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02033 03 45929063 45930996 Gma03g02033 03 45929063 45930996 ECH
Gma19g02070 19 49613149 49614703 Gma03g02033 03 45929063 45930996 GST
Gma03g02033 03 45929063 45930996 Gma10g00109 10 1086339 1089572 PCT
Gma03g02033 03 45929063 45930996 Gma02g00104 02 1054439 1056767 PCT
Gma10g00109 10 1086339 1089572 Gma03g02033 03 45929063 45930996 PCT
Gma02g00104 02 1054439 1056767 Gma03g02033 03 45929063 45930996 PCT