Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02031 ATGTCGAAGAGGAAGTTCGGATTCGAAGGTTTCGGCATAAACCGCCAATCCACCTACAGCTTCGAGCGACCCCAGGCCCCTCAGCGACTCTACATCCCTCCCTCCGCGCGTCacggccacgaccactacgaagacaccgacatcgacaacatcgactacgacgacaacaacagcaacaacaacaacaacaaggacgacgacgacgattacgggagcaataataacaacggtggcggcaacgacgaagacGAAATCGACCCCTTGGACGCCTTCATGGAGGGGATTCACGAGGAGATGCGGGCGGCCCCGCCGCCGAAGCCGAAGGAGAAGGCGGAGGACCGGTACCGCGACGACGAGGACGACGATCCCATGGAGAGCTTTCTGATGGCGAAGAAGGATTTAGGGTTAACTCTCGCGTCGGACGCGCTGCACGCTGGGTATGATTCCGATGAGGAGGTTTATGCTGCCGCGAAAGCTGTAGACGCTGGTATGATTGAGTATGATTCCGATGATAACCCTATTGTTATTGACAAGAAGAAGATTGAACCCATTCCTGCTCTTGATCACTCTTCCATTGATTACGAGCCCTTCACTAAGGATTTTTATGAGGAGACACCTTCAATATCAGGTATGAGTGAGCAGGATGTAAGTGAATACAGGAAGAGTTTGGCTATTCGTGTATCAGGTTTTGATGTTCCCAAGCCAATAAAGGCATTTGAGGACTGTGGGTTTTCTTCACAGATTATGAATGCTATTAAAAAACAAGGATATGAGAAGCCGACAACTATACAATGTCAGGCTTTGCCAGTTGTGCTTTCTGGCAGGGATATCATTGGTATAGCAAAAACTGGTTCTGGTAAAACTGCTTCTTTTGTACTTCCTATGATCGTGCATATCATGGATCAGCCTGAGCTTCAGAAGGAGGAGGGGCCCATAGGGGTGATATGTGCACCTACCCGAGAATTGGCACATCAGATTTTTCTGGAGGCCAAGAAATTTGCAAAAGCGTATGGGGTACGTGTCTCTGCTGTCTATGGTGGAATGTCAAAACTTGAACAGTTCAAAGAGCTTAAGGCGGGATGTGAGATAGTTGTTGCTACCCCTGGCAGATTGATAGACATGCTGAAGATGAAGGCATTGACGATGATGAGAGCAACTTACCTGGTGCTTGATGAGGCTGATCGGATGTTTGATCTTGGGTTTGAGCCGCAAGTAAGGTCCATTGTTGGGCAGATTAGGCCGGACCGCCAAACCTTACTCTTTTCTGCAACTATGCCTTGTAAAGTTGAAAAGTTGGCCAGGGAAATCCTTTCTGATCCTATTAGAGTTACTGTTGGAGAGGTGGGGATGGCAAATGAAGATATTACTCAAGTTGTTCACGTAACTCCTTCCGATTCTGAGAAATTGCCCTGGCTTTTGGAAAAGCTGCCTGAAATGATTGATCAAGGTGATACCCTAGTTTTTGCTTCGAAAAAGGCTACTGTGGATGAAATTGAATCACAATTGGCTCAAAGAGGCTTTAAAGTTGCTGCATTGCATGGTGATAAAGATCAAGCTTCTCGTATGGATATTTTACAGAAGTTTAAATCTGGCCTCTACCATGTGCTAATTGCAACTGATGTTGCTGCCCGTGGTCTTGACATCAAGTCAATTAAGTCAGTGGTAAACTTTGATATTGCAAAAGATATGGACATGCATGTCCATCGCATTGGAAGAACAGGCCGTGCTGGTGACAAGGACGGGGTTGCATACACTCTTATAACTCTGAAAGAAGCACGATTTGCTGGTGAATTGGTCAATAGCTTAGTTGCTGCTGGTCAGAATGTGTCTGTGGAGTTGATGGATCTTGCTATGAAGGATGGGAGATTCAGGTCAAAACGTGATGCAAGAAAAGGAGGTGGGAAAAAAGGCAAAGGTAGAGGAGGAGGTGGTGGGGGTGGCCGAGGTGTGCGAGGAGTGGATTTTGGCCTGGGCATTGGATATAATCCTGAGTCAAATAATGCACCATCTACCACAGCTCCCAGTCGATCTGCCGCTGTAAATTCTCTGCGAACAGGAATGATGTCACAATTCAAGAGTAACTTTGTTGCTGCTTCATCAAACTCTCAGAATCAAGGCTTTGGTAACAATACAAGCATGACTGCTAATAAGAGAACAGCACTCCCTGGTTTTGTATCCGGTGGATCAATTGGTGGTGACATAAATACTTATCAGAGTACTGCTTCACCCAATCCTGCTACATCAGCGGTAATTTCCACCAGTCAAGGTTATGGAGTAAATCCTGGTCAGAAGAGCACGAACAGTTCTAAACCTAAAGAAAGGCGGAGACCATCAGATCTGTTTATCCACCTTAGGTTGAATTCATCGCCGAGCATCAGATCCGAAATGTCGATCGGAGATGCTTTTCTGTGCTTACTGTTCATCGCAACTTGTTGGATTTCCGCTGCTTCTGCTGATTCCATCTATGGCTGCGGTGGATTTGTCGAGGCGAGCTCATCGTTGGTGAAGTCGAGGAAACAAACTGATGCCAAATTGGACTATTCCGATGTCACGGTTGAGCTTCAAACTGTGGATGGACTGGTAAAGGATAGAACACAATGTGCTCCCAATGGATACTATTTTATTCCAGTATATGACAAGGGTTCCTTTGTAATTAAAATTAATGGACCTCCAGGATGGACATGGGATCCAGAAAAGGTTCCTGTGGTTGTTGACAATAATGGTTGCAATGGTAATGAAGATATAAACTTTCGTTTCACAGGATTCACTATATCTGGTAGAGTTGTAGGAGCTGTAGGGGGAGAAAGTTGTTCAGTTAAAAATGGAGGTCCTTCAAATGTAAAAGTTGAACTATTGTCTCTTTCGGGGGATCTTGTCTCTTCAGTCTTGACTTCATCGTCAGGGAGTTACTTGTTTACAAATATAATTCCAGGAAAATACGAACTACGTGCTTCAAATCCTGATATGAAAGTTGAAGTTAAAGGTTCAACACAGGTTGAATTGGGCTTTGGAAATGGGGTAGTTGATGATATTTTCTTTGTCCCTGGGTATAGTATCGGTGGATTTGTTGTTGCTCAGGGAAATCCAATATTAGGAGTTCATATTTTCTTGTATTCAGATGATGTTTCTGAAGTAGAATGTTTGCAAGGTTCTGCTAATGGTCCACGACAAGAAGTTGCTCTCTGTCATGCTGTATCAGATGCTGATGGGAAGTTCACATTCAATTCAATACCTTGTGGAAGTTATGAACTTGTGCCCTACTATAAGGGTGAAAATACAGTATTTGATGTTTCACCGCCCAGCGTCTCAGTTAATGTTAAGCATCAGCATGCAACAGTGCCTCAAAAGTTTCAGGTAACTGGATTTTCTGTTGGAGGCTGCGTAGTTGATGGAAATGGCATGGGAGTGGAGGGGGTCAAAATCATAGTTGATGGTCATGAAAGGTCTATTACTGACAATCAAGGATATTACAAGCTTGATCAGGTTACATCCACGCACTATACCATAGAGGCCCAAAAGGAGCATTACAAATTCAAGAAACTGGAGAATTATATGGTATTGCCAAATATGGCTTCGATAGAAGATATCAATGCCATTTCATACAATCTTTGTGGTTTGGTTAGGATGGCTAGTGGTGATCTGAAAGTGAAGGTGGCTTTGACTCATGGACCTGATAACGTGAAACCACAAAAGAAGCAAACAGATGAAAATGGAAACTTCTGCTTTGAGGTTCTTCCTGGTGAATATCGCTTGTCAGCCATTGCTGCTACTCCTGAGAATGCTGCTGGACTCATGTTTGCTCCATCGTATATTGATGTCGTGGTCAAAAGTCCCATGTTGAATATTGAATTTTCACAAGCTTTGGTCAATATTCATGGTGATGTATCCTGCAAGGAGAAATGTGGTCCGTTTGTATCTGTTACTCTGGTGAGACAGGCTGATAAACATAATGAAGAGAGAAAGACAATTAGCTTGACCACCAAGAGTAGTGAATTTCTGTTTTCAAATGTTATTCCTGGAAAATACAGGCTTGAGGTCAAACATAGTTCCCCTGAATCAGTGACCTTGGAAGATAATTGGTGCTGGGAACAGAGCTTCATAGATGTAAATGTTGGTGCTGAGGACTTAGAAGGAATCCTTTTTGTTCAAAAAGGCTACTGGGTCAATGTTATCTCCACTCACAATGTTGATGGTTACCTGACTCAACCTGATGGGTCAAATGTGAATTTGAAAATTCGGAAAGGTTTCCAGCATATATGTGTAGAACAACCTGGTGTACATGAATTTAGTTTTGTTGACTCATGTATCTTCTTTGGGAGTTCATCAGTGAAAATTAATACATCTGATCAATTGCCCATCCATCTAATAGGAGAGAAGTATCTTCTTAATGGACAAATAAATGTGCAGTCTGGCTCACTTGATGCATTGCCTGATAATATAGTTGTTGATATTAAACATGATGGAGCTGGTGTTATTGATTATGCTACAGCCACATTTAAGTCCCATTCAAAAGATCAAATGGAGGCTGCTATATTTGAGTATTCCGTTTGGACCAATCTAGGAGAAAAGCTTACCTTCATTCCTCGCGACTCAAGGAATGATGGGCAGAAGAAACTTTTATTTTATCCTAGAGAACATCAAGTATCAGTGACTGATGATAATTGTCAAGTTTATATTCCTACATTTTCTTGTCAACTGGGTGTATATATTGAAGGATCAGTTTCACCTCCTCTTTCTGGCGTCCATATCAGAGTTTTTGCTGCTGGAGATAGCAGCTTTACTACACTTAAAAGTGGTGAATTGGTTCTTGAAACGACCACTGGTATTGATGGTTCCTTTGTGGCAGGTCCTCTGTACGATGATATTGGTTACAATGTTGAGGCTTCAAAGCCTGGATATCATTTAAAACAAGTTGCGCCTCATTCTTTTACTTGTCAGAAGCTTAGTCAAATTTCAGTACACATACATCACAAAGATGATTCTAAAGAGCCCATTCCTTCTGTTCTGTTGTCTTTGAGTGGTGACAATGGTTATAGAAACAACTCAGTATCAGGAGCTGGTGGGACATTCCTGTTTGACAATTTGTTTCCTGGAATGTTTTATTTGCGTCCTGTTTTGAAGGAGTATGCTTTCTCACCTCCAGCACAGGCAATAGATCTTGGAGCAGGGGAGTTCAAAGAAGTTGTTTTCCAGGCCACACGCGTAGCCTACAGTGCTACAGGTATAGTGTCTCTCTTGTCTGGTCAACCCAAAGGAGAAGTTTCGGTTGAAGCCCGGTCAGAGTCAAAAGGCTATTTTGAGGAAACTGTGACAGATTCATCTGGAAATTATCGTCTGAGAGGACTACTGCCTGATACTGACTATGTTGTTAAAGTGGCTAAAAGGGATGTGGGCAGTTCTAATATAGAGCGTGCATCTCCAGATTCTATTGCTGTCAAGGTTGGAACTGAGGATATCAAGGGATTGGATTTTATAGTTTTTGAGGAGCCGGAAATGACAATTATAAGTTGCCACGTTGAAGGAAATGGTACAGATGAACTACATAAACACCTGATGGTAGAAATCAGGTCAGCTAGTGACCTAAACAAGATAGAGTCAGTCTTCCCCCTGCCAATTTCAAACTTCTTCCAAGTGAAGGGCTTATCAAAAGGCAGACACCTTCTAAAGCTTCAATCTGGTCTCCCATCAAGCTCGCTTAAATTTGAATCTGATATCATTGAGGTTGACTTGGAGAAAAATGTTCAGATCCATGTTGGTCCAATGAGATACAGGATTGAAGATCAGCTGAAGCAGGAGTTGACTCCGGCACCAGTATTCCCTCTTATAGTTGCATTTCTAGTTGTTGCACTTTTTCTTAGCATGCCAAGATTGAAGGATTTGTATCAAGCCACGGTAGACATACCCACCCCAGGACTCACTGCGGCTTCAAGAAAAGACGTGAAGAAGCCGCTGTTGCGAAAGAAGACTTATTAA 5973 0.4184 MSKRKFGFEGFGINRQSTYSFERPQAPQRLYIPPSARHGHDHYEDTDIDNIDYDDNNSNNNNNKDDDDDYGSNNNNGGGNDEDEIDPLDAFMEGIHEEMRAAPPPKPKEKAEDRYRDDEDDDPMESFLMAKKDLGLTLASDALHAGYDSDEEVYAAAKAVDAGMIEYDSDDNPIVIDKKKIEPIPALDHSSIDYEPFTKDFYEETPSISGMSEQDVSEYRKSLAIRVSGFDVPKPIKAFEDCGFSSQIMNAIKKQGYEKPTTIQCQALPVVLSGRDIIGIAKTGSGKTASFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIFLEAKKFAKAYGVRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPCKVEKLAREILSDPIRVTVGEVGMANEDITQVVHVTPSDSEKLPWLLEKLPEMIDQGDTLVFASKKATVDEIESQLAQRGFKVAALHGDKDQASRMDILQKFKSGLYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITLKEARFAGELVNSLVAAGQNVSVELMDLAMKDGRFRSKRDARKGGGKKGKGRGGGGGGGRGVRGVDFGLGIGYNPESNNAPSTTAPSRSAAVNSLRTGMMSQFKSNFVAASSNSQNQGFGNNTSMTANKRTALPGFVSGGSIGGDINTYQSTASPNPATSAVISTSQGYGVNPGQKSTNSSKPKERRRPSDLFIHLRLNSSPSIRSEMSIGDAFLCLLFIATCWISAASADSIYGCGGFVEASSSLVKSRKQTDAKLDYSDVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKINGPPGWTWDPEKVPVVVDNNGCNGNEDINFRFTGFTISGRVVGAVGGESCSVKNGGPSNVKVELLSLSGDLVSSVLTSSSGSYLFTNIIPGKYELRASNPDMKVEVKGSTQVELGFGNGVVDDIFFVPGYSIGGFVVAQGNPILGVHIFLYSDDVSEVECLQGSANGPRQEVALCHAVSDADGKFTFNSIPCGSYELVPYYKGENTVFDVSPPSVSVNVKHQHATVPQKFQVTGFSVGGCVVDGNGMGVEGVKIIVDGHERSITDNQGYYKLDQVTSTHYTIEAQKEHYKFKKLENYMVLPNMASIEDINAISYNLCGLVRMASGDLKVKVALTHGPDNVKPQKKQTDENGNFCFEVLPGEYRLSAIAATPENAAGLMFAPSYIDVVVKSPMLNIEFSQALVNIHGDVSCKEKCGPFVSVTLVRQADKHNEERKTISLTTKSSEFLFSNVIPGKYRLEVKHSSPESVTLEDNWCWEQSFIDVNVGAEDLEGILFVQKGYWVNVISTHNVDGYLTQPDGSNVNLKIRKGFQHICVEQPGVHEFSFVDSCIFFGSSSVKINTSDQLPIHLIGEKYLLNGQINVQSGSLDALPDNIVVDIKHDGAGVIDYATATFKSHSKDQMEAAIFEYSVWTNLGEKLTFIPRDSRNDGQKKLLFYPREHQVSVTDDNCQVYIPTFSCQLGVYIEGSVSPPLSGVHIRVFAAGDSSFTTLKSGELVLETTTGIDGSFVAGPLYDDIGYNVEASKPGYHLKQVAPHSFTCQKLSQISVHIHHKDDSKEPIPSVLLSLSGDNGYRNNSVSGAGGTFLFDNLFPGMFYLRPVLKEYAFSPPAQAIDLGAGEFKEVVFQATRVAYSATGIVSLLSGQPKGEVSVEARSESKGYFEETVTDSSGNYRLRGLLPDTDYVVKVAKRDVGSSNIERASPDSIAVKVGTEDIKGLDFIVFEEPEMTIISCHVEGNGTDELHKHLMVEIRSASDLNKIESVFPLPISNFFQVKGLSKGRHLLKLQSGLPSSSLKFESDIIEVDLEKNVQIHVGPMRYRIEDQLKQELTPAPVFPLIVAFLVVALFLSMPRLKDLYQATVDIPTPGLTAASRKDVKKPLLRKKTY 1990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02031 1990 MobiDBLite consensus disorder prediction 736 767 - -
Gma03g02031 1990 SMART ultradead3 256 458 IPR014001 -
Gma03g02031 1990 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 268 443 IPR014001 -
Gma03g02031 1990 SUPERFAMILY Cna protein B-type domain 941 992 - -
Gma03g02031 1990 Pfam DEAD/DEAH box helicase 261 432 IPR011545 GO:0003676|GO:0005524
Gma03g02031 1990 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 237 265 IPR014014 GO:0003724
Gma03g02031 1990 PANTHER NODAL MODULATOR 1-RELATED 802 1971 - -
Gma03g02031 1990 MobiDBLite consensus disorder prediction 736 777 - -
Gma03g02031 1990 CDD DEADc_DDX42 248 444 - -
Gma03g02031 1990 SUPERFAMILY Cna protein B-type domain 1658 1718 - -
Gma03g02031 1990 MobiDBLite consensus disorder prediction 624 649 - -
Gma03g02031 1990 MobiDBLite consensus disorder prediction 98 117 - -
Gma03g02031 1990 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 389 397 IPR000629 -
Gma03g02031 1990 MobiDBLite consensus disorder prediction 1 86 - -
Gma03g02031 1990 Gene3D - 445 621 IPR027417 -
Gma03g02031 1990 CDD SF2_C_DEAD 455 587 - -
Gma03g02031 1990 Gene3D Immunoglobulins 937 1010 IPR013783 -
Gma03g02031 1990 MobiDBLite consensus disorder prediction 98 122 - -
Gma03g02031 1990 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 384 611 IPR027417 -
Gma03g02031 1990 Gene3D - 1124 1201 - -
Gma03g02031 1990 Pfam Helicase conserved C-terminal domain 473 577 IPR001650 -
Gma03g02031 1990 SUPERFAMILY Starch-binding domain-like 1014 1092 IPR013784 GO:0030246
Gma03g02031 1990 SUPERFAMILY Carboxypeptidase regulatory domain-like 1122 1189 IPR008969 -
Gma03g02031 1990 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 802 1971 - -
Gma03g02031 1990 SMART helicmild6 496 577 IPR001650 -
Gma03g02031 1990 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 446 IPR027417 -
Gma03g02031 1990 Gene3D - 200 444 IPR027417 -
Gma03g02031 1990 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 468 617 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02031 Gma-Chr3 45882991 45903108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02031 237 594 Eukaryotic Initiation Factors Gene Family AT3G13920 35.457 1.03e-60 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02031 - - gmx:100794049 2362.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02031 03 45882991 45903108 Gma03g02031 03 45882991 45903108 ECH
Gma19g02067 19 49562476 49582346 Gma03g02031 03 45882991 45903108 GST