Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02030 ATGGCGAGCTTGACTCGGAGATCACTGTCTCAACTCGGAACTATATCATCCATGAAGAAAATTCCGGGTATATTGAAAAAGGTTCAAGGCTTGGTGCTGAAATGGATTCTTATATTATCTTGCCTGGTATATATGATTGAGGCTGGTGAAAATGATAAAACAATGGAGCCCCCTTCTTTATATGATTCTAGATCACCTTTGGCCTTTGTTGTTGTTCATGATCTACCTCTAACAGCAAATCACCATGTGTTGAAGCATGTGCTTTCTCATGGTGCACCAATTGCAGCACTGTCAACAGTCAATCCTCCTTTATATGGTCCTTTCACAAGCAATGGCCACTCCCCTGCAAGTTCACATTTATCCATACCGTTCAAGAAGAAGAGTGAAGTGAAACCTCCAATTTCTGTCTTTAAAAATATTGCTCCTGTGCATTCTACTGCAGCTGCAGGCCCTTCCGCTTTGGCCCAGCCACCATTGTCTCCTTATGCTTCTAATTGTTGTAAACAAGACATGGTGCTGAAAAGGGGTAGTAAGGATTGCCACTGTGCATATCCCATAAAGCTAGACCTTTTTCTTTCGAATGTCTCTCAAAATCCTAGTTGGAATGATTTTCTTGAAGAATTAGCTACCCAGCTTGGGTTGCGAAATACCCAGATTGAACTGATAAACTTTTATGTACTCAGCTTATCAACATTAAATATATCAATGAATATTACTCCACATAAAGGCATCAGTTTTTCTGCCAATGAAGTTTCTAGAATAAACTCTTCGCTTTCAATGCATAAGGTTCAATTAGACCCTGGATTAGTGGGTGGATACAAACTTCTCAATTTAACGTGGTTTGAACCACCTCCGCCTTCTCAAGCTCCTACATTAGCTGCATCACCTGTGAATACACCTTTGCATCATTCACCTACTTCTACATCATCATCGAGTTCTCCGAAAAGAGGAAGGCATTCAAATTTGTTTCTTATTCTTGGAATTGCTATTGGCATAATCTTCATTGCTATCATATCTGTACTTATATTCTGTTTATGTACGTTTCTGTCAAAAGCAAAGACACCTCCGATAGAAActgAAAAGCCAAGGACAGAGAGTGCAATTTCAACTGTGGGTTCTCTTCCCCACCCAACTAGTACACGATTTATTGCTTATGAAGAGCTTAAAGAAGCAACAAACAATTTTGAACCAGCGAGTGTTCTTGGAGAAGGAGGGTTTGGTAGAGTTTTTAAAGGTGTCTTAAATGATGGTACTCATGTAGCAATTAAGAGGCTTACAAATGGAGGGCAACAGGGTGACAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTTTAGTAATCGTGACTCATCACAAAATGTACTTTGCTATGAGCTTGTCCCTAATGGAAGTTTGGAGGCTTGGCTTCATGGTCCCTTGGGAATCAATTGTCCTttggattgggacaccagaatgaagattgcgcttgatgctgcaaggggactttcATACCTGCATGAAGACTCACAGCCCTGTGTAATACATAGAGACTTCAAGGCATCCAACATATTGCTTGAGAACAATTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAAGCACCTGAAGGCAGATCTAATTATTTGTCTACTCGTGTCATGGGGACATTTGGGTACGTTGCTCCTGAATATGCCATGACTGGACACCTACTtgttaaaagtgacgtttatagctatggtgttgtcttgctggaactgcttactggcaggaagcctgtggaTATGTCACAGCCAACTGGACAAGAGAATCTTGTTACTTGGGCTAGGCCAATCCTTAGAGATAAGGACCGGTTGGAAGAGATTGCTGATCCAAGACTTGGTGGAAAGTATCCAAAGGAAGATTTTGTACGTGTTTGCACTATTGCTGCAGCCTGTGTTGCTCTAGAAGCAAACCAACGACCCACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAGCGCGTCACAGAATACCAAGATTCTGTGTTAGCCTCATCCAATGCACGACCCAACCTACGACAGTCCTCTAGCACTTTTGAATTTGATGGAACATCTTCAATGTTCTCTTCAGGTCCTTACTCTGGTCTAAGTGCCTTTGACAATGACAACATTTCTAGGACTGTGGTTTTCTCTGAAGATCTTTGTGAAGGACGATGA 2220 0.3901 MASLTRRSLSQLGTISSMKKIPGILKKVQGLVLKWILILSCLVYMIEAGENDKTMEPPSLYDSRSPLAFVVVHDLPLTANHHVLKHVLSHGAPIAALSTVNPPLYGPFTSNGHSPASSHLSIPFKKKSEVKPPISVFKNIAPVHSTAAAGPSALAQPPLSPYASNCCKQDMVLKRGSKDCHCAYPIKLDLFLSNVSQNPSWNDFLEELATQLGLRNTQIELINFYVLSLSTLNISMNITPHKGISFSANEVSRINSSLSMHKVQLDPGLVGGYKLLNLTWFEPPPPSQAPTLAASPVNTPLHHSPTSTSSSSSPKRGRHSNLFLILGIAIGIIFIAIISVLIFCLCTFLSKAKTPPIETEKPRTESAISTVGSLPHPTSTRFIAYEELKEATNNFEPASVLGEGGFGRVFKGVLNDGTHVAIKRLTNGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYFSNRDSSQNVLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKDRLEEIADPRLGGKYPKEDFVRVCTIAAACVALEANQRPTMGEVVQSLKMVQRVTEYQDSVLASSNARPNLRQSSSTFEFDGTSSMFSSGPYSGLSAFDNDNISRTVVFSEDLCEGR 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02030 739 Gene3D Phosphorylase Kinase; domain 1 376 472 - -
Gma03g02030 739 CDD STKc_IRAK 401 671 - -
Gma03g02030 739 Pfam Protein kinase domain 398 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g02030 739 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 24 739 - -
Gma03g02030 739 MobiDBLite consensus disorder prediction 292 317 - -
Gma03g02030 739 SUPERFAMILY Protein kinase-like (PK-like) 369 672 IPR011009 -
Gma03g02030 739 MobiDBLite consensus disorder prediction 289 317 - -
Gma03g02030 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Gma03g02030 739 ProSitePatterns Protein kinases ATP-binding region signature. 401 423 IPR017441 GO:0005524
Gma03g02030 739 Gene3D Transferase(Phosphotransferase) domain 1 473 691 - -
Gma03g02030 739 ProSiteProfiles Protein kinase domain profile. 395 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g02030 739 PANTHER OS01G0750732 PROTEIN 24 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02030 Gma-Chr3 45872482 45880278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02030 31 739 Receptor kinase-like Gene Family AT4G02010 68.214 0.0 961
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gma03g02030 Pkinase 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02030 - - gmx:100793528 1392.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02030 03 45872482 45880278 Gma03g02030 03 45872482 45880278 ECH
Gma19g02066 19 49554883 49561211 Gma03g02030 03 45872482 45880278 GST
Gma03g02030 03 45872482 45880278 Gma10g00114 10 1129796 1136735 PCT
Gma03g02030 03 45872482 45880278 Gma02g00108 02 1096342 1103723 PCT
Gma10g00114 10 1129796 1136735 Gma03g02030 03 45872482 45880278 PCT
Gma02g00108 02 1096342 1103723 Gma03g02030 03 45872482 45880278 PCT