Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02027 ATGGACAATAATACTAGTGCCTGTGCCTACCCCCAACTTGAGTCAGAAGAAGCATCTTCAGAGCACAAATCAGAAACTCAAACATCAAAGAAAAGGAAAATGGTTGAGAAAACAGTTGTGGCAGTGAGGGTAGGAGAGAAGGTTGGCAAGCTAAAGAATGAAGGGCTACCCTCAGATTTTTGGTCTTGGAGGAAATATGGACAAAAACCAATCAAAGGGTCTCCATATCCAAGGGGCTATTACAAGTGCAGCACATCCAAAGGTTGTTCAGCCAAAAAGCAAGTAGAGAGATGCAGAACGGATGCTTCAATGCTCATAATCACATATACCTCTACACATAACCATCCATGTCCCACTCCCATCACTACAAAATCTACCACCACAAAGGAGGAAGACCAAGAACATATAGAACTAGAAGAAGAAGAAGAGCAAAGGGATAATAATAATAATAAGCCCAGTGATGAAGTTACTAATGAAGAAAATTTTCATTACTTGCAATCTCCAATACGTTGCTCCAGCCAAGATATCATTATAGAACAAGAAGATCCTTTCAAACTAAACACGGAGAAAAGCCATGATCGAATGGATCTCCTCTTAGAGGAAGAGCCTCTTTGTTTTGCACAGCTCAAGAACTTGTCTGCTTCCAAAAACGAAGAACTTGACTTTTTCGATGAGCTTGAGGAGTTACCCATGTCTTCATCTTTGTTGCACTTTACGAGGAACATTTTTTCCGATGAAAGGATTCCCGTTGGCCCTTCTTGA 762 0.4081 MDNNTSACAYPQLESEEASSEHKSETQTSKKRKMVEKTVVAVRVGEKVGKLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDASMLIITYTSTHNHPCPTPITTKSTTTKEEDQEHIELEEEEEQRDNNNNKPSDEVTNEENFHYLQSPIRCSSQDIIIEQEDPFKLNTEKSHDRMDLLLEEEPLCFAQLKNLSASKNEELDFFDELEELPMSSSLLHFTRNIFSDERIPVGPS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02027 253 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 237 IPR044810 GO:0003700
Gma03g02027 253 Gene3D WRKY domain 43 119 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g02027 253 SUPERFAMILY WRKY DNA-binding domain 55 118 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g02027 253 SMART WRKY_cls 57 117 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g02027 253 MobiDBLite consensus disorder prediction 16 34 - -
Gma03g02027 253 ProSiteProfiles WRKY domain profile. 52 118 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g02027 253 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 16 237 - -
Gma03g02027 253 MobiDBLite consensus disorder prediction 142 156 - -
Gma03g02027 253 MobiDBLite consensus disorder prediction 1 34 - -
Gma03g02027 253 MobiDBLite consensus disorder prediction 116 156 - -
Gma03g02027 253 Coils Coil 131 151 - -
Gma03g02027 253 Pfam WRKY DNA -binding domain 59 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02027 Gma-Chr3 45853504 45855449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02027 2 119 WRKY Transcription Factor Family AT2G34830 55.462 2.42e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma03g02027 WRKY 4e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02027 03 45853504 45855449 Gma03g02027 03 45853504 45855449 ECH
Gma19g02062 19 49536072 49538046 Gma03g02027 03 45853504 45855449 GST