Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02020 ATGGCATCACCGATCCAACAACAACAACGCTCGACTACTACAAGTTCTGGATCTGAAGGAGGAGATCCGCATATCATCGATGAGAGGAAGCGGAAGAGGATGCTGTCGAACCGCGAGTCGGCGCGGCGATCGCGGATGAGGAAGCAGAAACAGCTGGAGGATCTGACCGATGAAGTTAGCAGATTGCAAAGCGCGAACAAGAAGCTTGCGGAGAACATAGAGGCCAAGGAAGAAGCGTGCGTCGAGACCGAAGCGGCGAACAGCATTCTGAGAGCACAGACAATGGAACTGGCCGATCGATTGCGCTTCTTGAACTCCATCCTTGAGATCGCTGAAGAGGTCGAAGGGTTATCCGTTGAGATTCCCGAGATTCCAGATCCTCTCCTCAAGCCCTGGCAGATTCCTCATCCGATACAACCGATTATGGCCACCGCAAACATGTTTCTGCGTTGA 453 0.5276 MASPIQQQQRSTTTSSGSEGGDPHIIDERKRKRMLSNRESARRSRMRKQKQLEDLTDEVSRLQSANKKLAENIEAKEEACVETEAANSILRAQTMELADRLRFLNSILEIAEEVEGLSVEIPEIPDPLLKPWQIPHPIQPIMATANMFLR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02020 150 MobiDBLite consensus disorder prediction 1 57 - -
Gma03g02020 150 MobiDBLite consensus disorder prediction 1 20 - -
Gma03g02020 150 Coils Coil 38 86 - -
Gma03g02020 150 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 32 47 IPR004827 GO:0003700|GO:0006355
Gma03g02020 150 SMART brlzneu 25 89 IPR004827 GO:0003700|GO:0006355
Gma03g02020 150 MobiDBLite consensus disorder prediction 22 57 - -
Gma03g02020 150 Gene3D - 27 84 - -
Gma03g02020 150 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 148 - -
Gma03g02020 150 CDD bZIP_plant_GBF1 30 80 IPR045314 GO:0003700|GO:0006355
Gma03g02020 150 Pfam bZIP transcription factor 29 80 IPR004827 GO:0003700|GO:0006355
Gma03g02020 150 SUPERFAMILY Leucine zipper domain 29 77 IPR046347 GO:0003700|GO:0006355
Gma03g02020 150 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 27 74 IPR004827 GO:0003700|GO:0006355
Gma03g02020 150 PANTHER BZIP TRANSCRIPTION FACTOR 53 8 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02020 Gma-Chr3 45800854 45802065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02020 9 148 bZIP Transcription Factor Family AT3G62420 52.857 8.28e-49 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma03g02020 bZIP_1 3.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02020 K25786 - gmx:780550 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02020 03 45800854 45802065 Gma03g02020 03 45800854 45802065 ECH
Gma03g02020 03 45800854 45802065 Gma19g02055 19 49482516 49483756 ECH
Gma19g02055 19 49482516 49483756 Gma03g02020 03 45800854 45802065 GST
Gma03g02020 03 45800854 45802065 Gma10g00126 10 1203136 1204444 PCT
Gma03g02020 03 45800854 45802065 Gma02g00121 02 1167252 1168570 PCT
Gma10g00126 10 1203136 1204444 Gma03g02020 03 45800854 45802065 PCT
Gma02g00121 02 1167252 1168570 Gma03g02020 03 45800854 45802065 PCT