Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02018 ATGGCTCAAGCATGCTCTTCACTTGGTGTCATTTTGAGTCATGTCAAATCTAGACAACTTCATCATCTGTTAACACCGGGTAAAGTTCTTCCTGATGTTTGTATGGATCTTAATCATTTCAAGGATGCCTTTGATTGGGCGGAAGCCAATAACTCTGGGCGTATAATACCCCGTGAAGGAGTTGACACAGCACATCAATTACTTATGTCAATGTTGGAAAGGATACATAACTATTGGAAGTTCCAGAAAATTTGTCAAAGAATATTCCTCAAGATTATGAACTGCGCTCATCCAGAAAAGGCTTCTTTAGATACTGGTCTCCAGATATTAAATACATTTCAGAGATTAATTGGGCGTTTTTGTGAACATCACACTAAGTGGAAGCAGTTGGTGTCTACAACTGCAGAACTGGATGTCTTGATCAGTTTAGCAATTGCCGGTGACTACTATGAAGGACCAACATGCAGACCTACTTTTGTAGGCACATTATGTACAAAAGAAGCTCCTTACCTGCATGCTAAAAGTTTGGGACACCCAGTCCGTAGGAGTGATACCTTAGGCAAGGGTGACTTTGTACCCAATGACATAACCATTGGTGGTTCAGATCATGCTAGCTTTATTCTTCTAACAGGTCCTAAGATGGGTGGGAAGTCAACTCTTCTTCGTCAAGTTTGCTTGACTGTGATTTTGGCCCAGGTAGGAGCTACTGCATCAATGCTGGGATTCAGTATTAGAACATCTTGTGCGGATGGTGCAGTTTTTTTATCCGGTGTAATCATCAGTGGCATATTCTGCGTTGTTAGTTCTTCTCTCATTGACATCATGCTGACCAAGGTGGCTCCGTTATTATTTAAAGCATTTGAGACGGTTCCTAACTTAGCCCAAATTTCATACATAGAAAAGAAAGGTTTATTTTTCTCATACTACACTGATTATGGTCAAGTTTTGGCAATGTACTCAAACTCATCATCACTTTCCACTTCTTTTGGGGGTGCCTCAAATTTAAGCATATATTATATCCAGCCCGTAAATCGTGACACTGGAGAGTTATATGGGAAAGCCATAATATCTGAAGTACCATCTAATATTATCAATACAAGTTGGTTTGTGAAAGCAGTTAATAGTTCACTTAGTTATGCCTCATTGGGAACCAAGTGGAACAATGATCATGATCTTCTATTCGTTAGTTCATCTAGAATAAAGGGGACACAAGTGATCTCTCTAGGCATTCCAGTAACAACTATCACTGATTTCTTCACTCCGGTTGGGGCGAATTTGTCTTTGGTTACCAAAGATGGAAAAATGCTTGTAGAAGGGATTCAAAATACTCGTTTGGGCTTCTCTAATGACATGGTTTATTTCCAATCAGTGAATGCAAATGGTGATCAAACAAGTTATGACGGCGTTGTTTCATGCAAAGATGGAGATGCAGAAGCTGCCTCTATTTTGAATATTCAGGGTGTTGAGTATTTAATTCGCTGCTCCACCATTGATATAATGGAAATAAAATCGGTGTATGTTTTGGCTGTCCCACGAAAAGGATTGGACCACTTTGTTCTGGACATTAAGAAAAAAGGATTGGCACTATTGACAACAATGATTGTCATGATACTCATTGCCATGGTCAGTTTTCTATACATAAATGTTAGATCATTAAGGCGAGAAATGCATTTGTGTTGGTCACTCATCAAACAAAATGAAGCCACACAACAAGCTGAGCGAAAATGTATGAACAAGAGCCTTGCTTTTGCTAGTGCCAGCCATGATGTTCGCGCTTCGCTGGCGGGCCTTACTGGTTTGATAGAAATGTCCTTTCATGAAGTTTCTCCTGATTCTGAATTAGGAACCAACTTAAGACAAATGGATTCTTGTACCAAAGATTTACTAGGACTATTGAATTCTATACTTGATGCAAGTAAAGTTGAAGCTGGCAAAATGCTGCTTGAGGAAGAGGAATTTGATGTATTTCAACTCCTTGAAGATGTGGTTGATTTATACCATTCTGTGGCTATGAAGAAAGGAGTAGATATTGTGTTGGACCCTTGCAATGGTTCTGTACTCAGATATTCGCGCACGAAAGGCGACAGAGGAAAACTCAAACAAGTTTTGTGCAATTTACTGAGCAATGCTGTTAAATTTACCGAGGAGGGGCACATAGCTGTTCGAGCATGGGCTCAGAAGCCAAGCTTGCAGAGCTCAATGATTGCTACTCACCAATACGGGTCCAGTAGACTTTTGTCGCGCTTGTGTTGCCGCCAAAATGAAGCACGTGATGACGTGGAAGACTTGAACATCCAACAAGATCCAAATTGTATGGATTTTACTATTGAAGTGGATGACACTGGCAAAGGAATTCCTAAAGAGAAGCACAAGTCTGTTTTTGAAAATTATGTCCAAGTCAAAGAAACTACTCTTGGCCAAGAAGGAACTGGCTTGGGACTTGGTATTGTTCAGTCACTGGTACGTTTGATGCATGGAGATATTGAAATCATGGACAAGGATATTGGTGAAAAGGGAACCTGCTTTAGGTTCAATGTTCTCCTCACTGCCCATGAGACACAGATGAATGATGACACAAGAGATGACCAAGCTGGATCAGGTAACAAAAATCAATCTCATGGACTAACCATGAGTCCCAAGTTATCTATTTGGACCCGTAGTCCTAGATCCGAGGCTTCTCGAGTTGTTTTATTGATTCAAAATGAGGAGCGTCGAGGGACTACGCAGAGGTTCATGGAGAGGTTAGGGATCAAAGTTAAGGTTGTGAAGGAGTGGAGACAACTTCATTACACTCTGAAGAAGATCATCAAACAAAAGGGTCTCCATCCAAATAGCTCAAGCTCGCCAGAGTCTTCAGATTCTCCCTCTGCATCAAGCTGCACAAACGGAGTCCCTTTGAGTGCACAAGATGGAACTAATTACATAAGTTCAATCTTCAAGAGAACAGATATTGAAGCTTCCTCGGGTTTTGTCCTGATTGTGATTGATGCTAATGCAGGACCTTTTTCAGAGCTTTGCAAAGTGGTAGCTGAGTTCAAAAGAGGCCTTTGTTATCCTTGTAGGGTGGTTTGGTTGGAGAATCCACTTATACCTTCTGTGGACAACAAAATCCTTAACAAGGATGTTTCTAATTCTAATGACATTGTCTTGTCTAAGCCACTTCATGGTCATCGTTTATTCCAAGTCATAAGGATTCTCCCCGAGTATGGAGGTGTTTGGCCATGCAGTTCTAGTGAAACAAAGAAAGAAAAGGGTCAAGTTTCCTTAACTGATGAAGGTGCAATTCGACGTGTTGAACTACAAGAGTGTGGCAGCTCAAGCGTTACACAGCAATCTTATGATAGATCTAGAGCAAGAAAATCTCATATCCACCAAGGAGAAATACAAGAATGTGAAGAGTTAAGCAATGAAAAACCCTTGTGGGGTATGAAATGTTTGGTTGTTGAGGACGTTGTTTTGTTACGTAGGATAACTAAGTCTACTCTTGATCGGCTTGGTGCTTCTGTCATGGAATGTGAGAATGGTGAACAAGCTGTTCAGACAGTTGAAGAGGGTCTAACTAGGAATTCTTCCAATCGTCCATGTGATTTCATCTTAATGGACTGCCAGATGCCGGTAATGGATGGATATGAGGCAACGAGACGGATAAGGGAGATTGAGAAGTCTCATGGTGTTCACATTCCTATCTTTGCATTAACAGCTAATACAGGGAAAGAGGCAATATTGTCCATTGAAGCTGGAATGGACGATCACTTAATCAAACCCATCAACAAAGAGGCTTTACTTAAAGCCATCAAAAGAATATATACTAAAGAGTGA 3819 0.4069 MAQACSSLGVILSHVKSRQLHHLLTPGKVLPDVCMDLNHFKDAFDWAEANNSGRIIPREGVDTAHQLLMSMLERIHNYWKFQKICQRIFLKIMNCAHPEKASLDTGLQILNTFQRLIGRFCEHHTKWKQLVSTTAELDVLISLAIAGDYYEGPTCRPTFVGTLCTKEAPYLHAKSLGHPVRRSDTLGKGDFVPNDITIGGSDHASFILLTGPKMGGKSTLLRQVCLTVILAQVGATASMLGFSIRTSCADGAVFLSGVIISGIFCVVSSSLIDIMLTKVAPLLFKAFETVPNLAQISYIEKKGLFFSYYTDYGQVLAMYSNSSSLSTSFGGASNLSIYYIQPVNRDTGELYGKAIISEVPSNIINTSWFVKAVNSSLSYASLGTKWNNDHDLLFVSSSRIKGTQVISLGIPVTTITDFFTPVGANLSLVTKDGKMLVEGIQNTRLGFSNDMVYFQSVNANGDQTSYDGVVSCKDGDAEAASILNIQGVEYLIRCSTIDIMEIKSVYVLAVPRKGLDHFVLDIKKKGLALLTTMIVMILIAMVSFLYINVRSLRREMHLCWSLIKQNEATQQAERKCMNKSLAFASASHDVRASLAGLTGLIEMSFHEVSPDSELGTNLRQMDSCTKDLLGLLNSILDASKVEAGKMLLEEEEFDVFQLLEDVVDLYHSVAMKKGVDIVLDPCNGSVLRYSRTKGDRGKLKQVLCNLLSNAVKFTEEGHIAVRAWAQKPSLQSSMIATHQYGSSRLLSRLCCRQNEARDDVEDLNIQQDPNCMDFTIEVDDTGKGIPKEKHKSVFENYVQVKETTLGQEGTGLGLGIVQSLVRLMHGDIEIMDKDIGEKGTCFRFNVLLTAHETQMNDDTRDDQAGSGNKNQSHGLTMSPKLSIWTRSPRSEASRVVLLIQNEERRGTTQRFMERLGIKVKVVKEWRQLHYTLKKIIKQKGLHPNSSSSPESSDSPSASSCTNGVPLSAQDGTNYISSIFKRTDIEASSGFVLIVIDANAGPFSELCKVVAEFKRGLCYPCRVVWLENPLIPSVDNKILNKDVSNSNDIVLSKPLHGHRLFQVIRILPEYGGVWPCSSSETKKEKGQVSLTDEGAIRRVELQECGSSSVTQQSYDRSRARKSHIHQGEIQECEELSNEKPLWGMKCLVVEDVVLLRRITKSTLDRLGASVMECENGEQAVQTVEEGLTRNSSNRPCDFILMDCQMPVMDGYEATRRIREIEKSHGVHIPIFALTANTGKEAILSIEAGMDDHLIKPINKEALLKAIKRIYTKE 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02018 1272 Pfam Response regulator receiver domain 1146 1266 IPR001789 GO:0000160
Gma03g02018 1272 Gene3D - 561 645 - -
Gma03g02018 1272 SMART REC_2 1143 1265 IPR001789 GO:0000160
Gma03g02018 1272 MobiDBLite consensus disorder prediction 855 883 - -
Gma03g02018 1272 Gene3D - 110 120 - -
Gma03g02018 1272 SMART HKATPase_4 694 850 IPR003594 -
Gma03g02018 1272 CDD HisKA 579 640 IPR003661 GO:0000155|GO:0007165
Gma03g02018 1272 Gene3D - 121 144 - -
Gma03g02018 1272 ProSiteProfiles Histidine kinase domain profile. 585 850 IPR005467 -
Gma03g02018 1272 MobiDBLite consensus disorder prediction 865 883 - -
Gma03g02018 1272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 235 IPR027417 -
Gma03g02018 1272 CDD REC_hyHK_CKI1_RcsC-like 1146 1265 - -
Gma03g02018 1272 SMART HisKA_10 578 644 IPR003661 GO:0000155|GO:0007165
Gma03g02018 1272 Pfam MutS domain V 208 236 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gma03g02018 1272 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 565 646 IPR036097 GO:0000155|GO:0007165
Gma03g02018 1272 Gene3D - 646 854 IPR036890 -
Gma03g02018 1272 MobiDBLite consensus disorder prediction 940 965 - -
Gma03g02018 1272 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 694 849 IPR003594 -
Gma03g02018 1272 Gene3D - 1120 1271 - -
Gma03g02018 1272 ProSiteProfiles Response regulatory domain profile. 1144 1269 IPR001789 GO:0000160
Gma03g02018 1272 PANTHER HISTIDINE KINASE CKI1-LIKE 232 1268 - -
Gma03g02018 1272 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 633 845 IPR036890 -
Gma03g02018 1272 PRINTS Bacterial sensor protein C-terminal signature 774 788 IPR004358 GO:0016310|GO:0016772
Gma03g02018 1272 PRINTS Bacterial sensor protein C-terminal signature 808 826 IPR004358 GO:0016310|GO:0016772
Gma03g02018 1272 PRINTS Bacterial sensor protein C-terminal signature 792 802 IPR004358 GO:0016310|GO:0016772
Gma03g02018 1272 SUPERFAMILY CheY-like 1140 1269 IPR011006 -
Gma03g02018 1272 PANTHER TWO-COMPONENT HISTIDINE KINASE 232 1268 - -
Gma03g02018 1272 Gene3D - 153 250 IPR027417 -
Gma03g02018 1272 SUPERFAMILY DNA repair protein MutS, domain III 8 147 IPR036187 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02018 Gma-Chr3 45779418 45789538 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02018 277 1271 Histidine Kinase Gene Family AT2G47430 40.262 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma03g02018 HATPase_c 3.1e-26 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02018 - - gmx:100790376 1946.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02018 03 45779418 45789538 Gma03g02018 03 45779418 45789538 ECH
Gma19g02053 19 49452345 49462979 Gma03g02018 03 45779418 45789538 GST