Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01997 ATGGCGGCAGAGGCGGCTTTGTTCTTTTCTGTGGCATCAGTGGTGGAGGACGTGCTTCAGCAGCACGGTCCTCGCCTCAAAGATCTTGATTTGGAATCTAGGAAAGCCGAAGAAGCTGCATCAAGAAGATACGAAGCTGCGGGGTGGTTGAGAAAAATGGTTGGAGTTGTTGCAGCCAAAGATTTACCAGCAGAACCCTCTGAGGAAGAGTTTAGGCTTGGTTTGAGGAGTGGGATTATTCTCTGTAATGTTATTAATAAAGTTCAATCCGGGGCGGTACCCAAGGTTGTGGAGAGTCCTGTTGATTCTGCATTGATCCCTGATGGGGCACCATTAACGGCATATCAGTATTTTGAAAACGTGAGGAATTTTCTGGTGGCTGTCCAAGAAATTGGAATTCCTATCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCATCTAGGATTGTCAATTGCGTGTTGGCCCTGAAATCCTACAGTGAATGGAAAATGAGCGGGTCAAATGGTGTGTGGAAATTTGGTGGAAATCTCAAACCAACTGTGTCTGCAAAATCTTTTGTGAGAAAAAATTCGGATCCATTTACTAATTCCTTGTCAAGGACTTCGTCGCTCAATGATAAATCTATTGCTGCTCTTAATTCTGATGTTGAGAATATTAAAATGTCTGGTTCCCACTCTTTGAGTATGCTTGTTCGGGCAATTTTATCAGATAAGAAGCCAGATGAAGTTTCAACGTTGGTTGAATCTGTTTTAAACAAAGTTGTAGAGGAGTTTGAGCAACGAATTGCAAGCCAAGGTGAACAGACAAAAGTAACTTCAAGAGATCCTGTTTCTCAGAGCAACGGGTCTGCCATGGCAGATAAAAAGGGGGAGAAGAAGATTCATGTGGCAACGAAAAAAGAGGATTACATTCATAAAAATCAAGTTGCTACTATGGTAACAACAAAAAAAGAGGGCCACAGTCATAAAAATCAAGTTGCTGATGAGGAATCACAAAGGCAACTTATGAAGCAGAAAATGCTCTTCGACCAGCAGCAAAGAGAAATTCAGGAGCTAAGGCATACTCTTCACTCCACAAAAGATGGTATGCAGTTCATGCAAATGAAATTTCATGAGGAGTTCTCCAATCTTGGCATGCACATTCATGGCTTAGCTAATGCTGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGCAAACTATACAATCAAGTCCAGGATCTTAAGGGAAGTATTAGGGTGTACTGTCGTGTAAGACCCTTCTTTCCTGGACAAGCAAACCATTTGAGTGCAGTGGAAAATATAGAAGATGGAACTATCACAGTTAATATTCCTTCAAAGAATGGGAAGGGACGCAGGTCCTTCAACTTTAACAAAATCTTTGGACCATCTGCAACCCAAGCCGAGGTCTTCCTAGATATGCAGCCACTCGTTAGGTCTGCTCTTGATGGTTTTAATGTTTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACCTACACTATGACTGGACCAAAAGAGATCACAGAGAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGTGATTTGTTTCTTATAGCAGATCAAAGGAGGGACACTTTCCACTATGACGTTTCTGTTCAAATGATTGAGATTTACAATGAGCAAGTCAGGGATCTGCTGGTCACTGATGGAACAAACAAAAGATATCCTTTTACCAAAATTCGAAGTAGTTCTCAAAAAGGACTCAGTGTGCCAGATGCAAGCCTTGTTCCTGTATCATCTACTATTGATGTTATTGAACTAATGAACCTTGGGCAAAGGAACCGTGCAGTTGGAGCAACAGCCCTTAATGACCGCAGTAGCCGATCTCATAGTTGCTTGACTGTTCATGTTCAGGGAAGAGATTTGACATCTGGAGCTATCCTTCGTGGTTGCATGCATTTGGTTGACTTGGCAGGAAGTGAGAGGGTGGATAAATCTGAGGCCACAGGAGATAGACTAAAAGAAGCACAGCATATTAACAAATCTCTTTCAGCTTTGGGAGATGTCATTGCTTCCCTTGCTCAGAAAAACTCACACGTACCTTACAGAAATAGTAAACTCACACAACTACTCCAAGATTCACTTGGAGGACAGGCCAAGACACTAATGTTTGTTCACATAAGTCCAGAGAGTGATGCTATTGGAGAAACAATTAGTACCTTAAAATTTGCTGAAAGAGTTGCCACAGTTGAACTTGGTGCTTCTCGAGTAAACAAAGATAGTGCAGATGTTAAAGAGCTCAAAGAACAGATTGCCAGCCTCAAGGCAGCACTGGCAAGAAAGGAAGGAGAATCAGAACATTCTTTTTCCAGCAGCTCTGAAAAATACAGAACAAAAGCTAGTGAGCTATCACCTTATCATATAAACCAGCGAGATCCTGACACTGTGGATCAGCTTGGTTGCCGGCAACCAATGGTTGAGGTTGGCAACATAGAACTTCAGAGTAATACCACAGTGAGGCACAAAACTCAGAGCTTTGATTTCGATGAGATATCAGCAAATTCACCACCATGGCCCCCAGTGAACAATAGTCTTGCACAAAACTATGGGGAGGATGACAAAGAAAGTGGTTCTGGTGAATGGGTTGACAAGGTCATGGTCAACAAGCAAGATGTAAACAAAACTGAGAACCTCTTGGGGTGTTGGCAAGCAGCAAACAATGGGAACTTATCTGAGGCCTTTTATCAGAAATATATAGAAGATTCTCCCAAAATGTACTCGGAACAATCCTATACTATGTTCATGGGAGCCAACCAGTTTAACATTGCGGGTTCTGATGACATCATGGATGAGCTTGATGCTGCAACCAGTGATTCCTCAGAACCTGACTTACTTTGGCAATTTAATCATTCCAAACTTAGCAGCGTGACCAATGGAATTGGATCAAAGACTATGAGATCTATCTCAAAGGCAGCAAAAAACAGCCCTGAGTTGAGCAAGAATGCTGTTCATTCTTCTCCTCTAGGTCCTTCACCTTCATTGAAAAACTCAAATGGTGTCCCACATCGATCAGGAAGGCATCCGGCTCCAGTTGACGTGAAACGTAGAACTGGGAATAGAAAATAA 3096 0.4212 MAAEAALFFSVASVVEDVLQQHGPRLKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQSGAVPKVVESPVDSALIPDGAPLTAYQYFENVRNFLVAVQEIGIPIFEASDLEQGGKSSRIVNCVLALKSYSEWKMSGSNGVWKFGGNLKPTVSAKSFVRKNSDPFTNSLSRTSSLNDKSIAALNSDVENIKMSGSHSLSMLVRAILSDKKPDEVSTLVESVLNKVVEEFEQRIASQGEQTKVTSRDPVSQSNGSAMADKKGEKKIHVATKKEDYIHKNQVATMVTTKKEGHSHKNQVADEESQRQLMKQKMLFDQQQREIQELRHTLHSTKDGMQFMQMKFHEEFSNLGMHIHGLANAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFFPGQANHLSAVENIEDGTITVNIPSKNGKGRRSFNFNKIFGPSATQAEVFLDMQPLVRSALDGFNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFLIADQRRDTFHYDVSVQMIEIYNEQVRDLLVTDGTNKRYPFTKIRSSSQKGLSVPDASLVPVSSTIDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPESDAIGETISTLKFAERVATVELGASRVNKDSADVKELKEQIASLKAALARKEGESEHSFSSSSEKYRTKASELSPYHINQRDPDTVDQLGCRQPMVEVGNIELQSNTTVRHKTQSFDFDEISANSPPWPPVNNSLAQNYGEDDKESGSGEWVDKVMVNKQDVNKTENLLGCWQAANNGNLSEAFYQKYIEDSPKMYSEQSYTMFMGANQFNIAGSDDIMDELDAATSDSSEPDLLWQFNHSKLSSVTNGIGSKTMRSISKAAKNSPELSKNAVHSSPLGPSPSLKNSNGVPHRSGRHPAPVDVKRRTGNRK 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01997 1031 SMART kinesin_4 410 748 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma03g01997 1031 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Gma03g01997 1031 PRINTS Kinesin heavy chain signature 641 659 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma03g01997 1031 PRINTS Kinesin heavy chain signature 610 627 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma03g01997 1031 PRINTS Kinesin heavy chain signature 485 506 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma03g01997 1031 PRINTS Kinesin heavy chain signature 690 711 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma03g01997 1031 SUPERFAMILY Calponin-homology domain, CH-domain 38 172 IPR036872 -
Gma03g01997 1031 Gene3D - 27 182 IPR036872 -
Gma03g01997 1031 ProSiteProfiles Kinesin motor domain profile. 412 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma03g01997 1031 Gene3D Kinesin motor domain 407 782 IPR036961 -
Gma03g01997 1031 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 412 772 IPR027417 -
Gma03g01997 1031 MobiDBLite consensus disorder prediction 264 286 - -
Gma03g01997 1031 Coils Coil 747 774 - -
Gma03g01997 1031 MobiDBLite consensus disorder prediction 264 293 - -
Gma03g01997 1031 Pfam Kinesin motor domain 418 739 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma03g01997 1031 MobiDBLite consensus disorder prediction 979 1010 - -
Gma03g01997 1031 CDD KISc_C_terminal 410 742 - -
Gma03g01997 1031 SMART ch_5 42 160 IPR001715 GO:0005515
Gma03g01997 1031 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 1028 - -
Gma03g01997 1031 MobiDBLite consensus disorder prediction 1017 1031 - -
Gma03g01997 1031 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Gma03g01997 1031 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1028 - -
Gma03g01997 1031 Coils Coil 336 356 - -
Gma03g01997 1031 MobiDBLite consensus disorder prediction 979 1031 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01997 Gma-Chr3 45602285 45607825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01997 400 776 Calmodulin-binding Proteins AT5G65930 41.114 4.62e-76 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01997 K10406 - gmx:100795476 1982.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01997 03 45602285 45607825 Gma03g01997 03 45602285 45607825 ECH
Gma03g01997 03 45602285 45607825 Gma19g02030 19 49243201 49250346 ECH
Gma19g02030 19 49243201 49250346 Gma03g01997 03 45602285 45607825 GST
Gma03g01997 03 45602285 45607825 Gma10g00155 10 1460697 1463006 PCT
Gma03g01997 03 45602285 45607825 Gma02g00149 02 1424792 1427388 PCT
Gma10g00155 10 1460697 1463006 Gma03g01997 03 45602285 45607825 PCT
Gma02g00149 02 1424792 1427388 Gma03g01997 03 45602285 45607825 PCT