Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01996 ATGTTGGGCACCGTCGAGTCAAACGGTGCCGTTTGTTATTATTCAGAGCTTGGGATTGTCAAACATTGCACCGACGACGAAATTCGATGCGCTTATCGTAAGATGGCTCTGAAGTGGCATCCTGATAGGTGGATCAAGGACCCTAAGCTTGCACTAGAAGCTAAAAACCGATTCCTGCGCGTACAAGAGGCTTATTCAGTTTTGTCTAATAAAGGGAAGAGAAGGATATATGATGCTGGCTTGTTTGGTCTGATCGGAGAGGATGATGATGAGGGATTTCTTGATTTCATGCAAGAAATGGCCTTGATGATGCAGAAAGTGAGACCCAAGGATGAGAAAGGCATGTTGGAGGATCTTCAAGGATTGTTAATCGATAAGATGGCAGATAATGAAGGGATGGAAAAGTCTGGGTTAAGCTGGAATTCATCTCCATGTCCTACAAAAAGGGCACGTATCTTATGA 462 0.4394 MLGTVESNGAVCYYSELGIVKHCTDDEIRCAYRKMALKWHPDRWIKDPKLALEAKNRFLRVQEAYSVLSNKGKRRIYDAGLFGLIGEDDDEGFLDFMQEMALMMQKVRPKDEKGMLEDLQGLLIDKMADNEGMEKSGLSWNSSPCPTKRARIL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01996 153 Gene3D DnaJ domain 4 91 IPR036869 -
Gma03g01996 153 SMART dnaj_3 11 73 IPR001623 -
Gma03g01996 153 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 6-LIKE 5 152 - -
Gma03g01996 153 PANTHER PUTATIVE, EXPRESSED-RELATED 5 152 - -
Gma03g01996 153 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Gma03g01996 153 CDD DnaJ 12 70 IPR001623 -
Gma03g01996 153 Pfam DnaJ domain 13 78 IPR001623 -
Gma03g01996 153 PRINTS DnaJ domain signature 14 32 IPR001623 -
Gma03g01996 153 PRINTS DnaJ domain signature 32 47 IPR001623 -
Gma03g01996 153 PRINTS DnaJ domain signature 53 73 IPR001623 -
Gma03g01996 153 SUPERFAMILY Chaperone J-domain 10 99 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01996 Gma-Chr3 45597845 45599493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01996 12 79 C2H2 Transcription Factor Family AT1G74250 43.478 2.06e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01996 - - gmx:100794942 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02029 19 49239355 49240934 Gma03g01996 03 45597845 45599493 GST