Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01974 ATGATTATTATAGCACGCCTTATGTTTCTTCTTGCATTGTTTCTTTTACTCGTAACAAATACAGGCCAAATGGTATTTGCACAAGATGACAATAATGTTAGAGATGCTTGCAGTGTGACAAGGTTCCAAAGCCTTTGTGTTCAGACGCTAGGGCATTTTTCCCGCACTGCAGGAACAAGCCCCAGCAAGTGGGCACGCGCGGGAGTATCCGTGTCAATAGGCGAGGTCAAGAATGTTGAAGCATATCTAGCACAAGTGAAACGTCAAGGACAATTGAAGGGAAGAAACAGTGTTGCCCTTTCAGATTGTGTTGAAACTTTTGGCTATGCCATTGACGAGCTTCACAAATCACTTGGCGTGCTAAGGAGCCTAAGCAAAAGCAAGTTCAGCACCCAAATGGGTGACCTCAACACGTGGATCAGTGCAGCACTCACTGATGAGGTGACTTGCCTCGATGGGTTTGAAGGCAGCAAGGGGACCAATGTTAAATTGCTGCAAAACCGGGTTCAGAATGCGTCTTACATCACAAGTAACGCTCTTGCTCTCATCAACAAACTTGCCACTGAAGGTCTGGGAAGCATCAATGATCCATAG 594 0.4579 MIIIARLMFLLALFLLLVTNTGQMVFAQDDNNVRDACSVTRFQSLCVQTLGHFSRTAGTSPSKWARAGVSVSIGEVKNVEAYLAQVKRQGQLKGRNSVALSDCVETFGYAIDELHKSLGVLRSLSKSKFSTQMGDLNTWISAALTDEVTCLDGFEGSKGTNVKLLQNRVQNASYITSNALALINKLATEGLGSINDP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01974 197 CDD PMEI-like_3 36 188 - -
Gma03g01974 197 SMART PMEI_2 28 182 IPR006501 GO:0004857
Gma03g01974 197 Pfam Plant invertase/pectin methylesterase inhibitor 32 182 IPR006501 GO:0004857
Gma03g01974 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 186 IPR035513 -
Gma03g01974 197 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 12 181 - -
Gma03g01974 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 181 - -
Gma03g01974 197 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 186 IPR006501 GO:0004857
Gma03g01974 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 188 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01974 Gma-Chr3 45445476 45446286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01974 33 186 Carbohydrate Esterase AT3G14310 32.704 5.81e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01974 - - gmx:100791264 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01974 03 45445476 45446286 Gma03g01974 03 45445476 45446286 ECH