Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01971 ATGAGAGCTGGTGAGTTTTTCCACTCAGCTCAAAGCCGAGACTTAGAGCAGCAGAGAGAACATGAATTATGCCACCTGAGTGGGGAATCTATAGAAACACCTTTATTACAGGACCAAGAATTGTCTGTTGATTCATCAAAGCAAGTTAAGTTGGGGTTTTTAGCAGGTCTTGTTCCCAGGGAAAAGTCCATGGTATTTGATAGAATTTTATTTTGTGCTACTAGAGGAAATGTATTTTTGAGGCAGGCGACTGTTGAGGATCCCGTCACAGACCCTGTTTCTAGAGAAAAGATGTTCACCTGCAGACTGAGAAAAAAGTTTTTGTGGTCTTCTATGCTGGTGAAAAAGAAAAAGCCAAGATTCTTAGATGTCTCCTATGTTGGACTACTGCACCGGGATAACTTGCTAAATACTATTGGGGCTCAATTTGAGCAACGAGATGTTTTGGTAAATGACGTAGCAGTGGAAGTGCTAGAAGGTGATCCTAGAAATGTTCTTTGTGATGCCGTGGAAAAGCATCATGCTTCAATGTTGGTTGTGGGTAGTCATAGTTACGGGGCTTTAAAAAGGGCGGTTTTAGGTAGTGTAAGTGACTATTGA 600 0.415 MRAGEFFHSAQSRDLEQQREHELCHLSGESIETPLLQDQELSVDSSKQVKLGFLAGLVPREKSMVFDRILFCATRGNVFLRQATVEDPVTDPVSREKMFTCRLRKKFLWSSMLVKKKKPRFLDVSYVGLLHRDNLLNTIGAQFEQRDVLVNDVAVEVLEGDPRNVLCDAVEKHHASMLVVGSHSYGALKRAVLGSVSDY 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01971 199 PANTHER VACUOLAR PROTON ATPASES 2 98 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gma03g01971 199 Gene3D HUPs 129 199 IPR014729 -
Gma03g01971 199 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 132 199 - -
Gma03g01971 199 Pfam Universal stress protein family 148 199 IPR006016 -
Gma03g01971 199 Pfam V-type ATPase 116kDa subunit family 3 98 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gma03g01971 199 CDD USP_Like 131 199 - -
Gma03g01971 199 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 2 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01971 Gma-Chr3 45414755 45419926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01971 2 97 Primary Pumps ATPases(2) AT4G39080 61.458 4.83e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01971 K02154 - gmx:102663147 251.136