Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01949 ATGGTGAAGATGAAGGGGAAAAGCCAAAGCCAAAGGATTGGAAAAAAGAGTAGAAAAATGAAGGGCGCGTTGAGTACCACTACCAACACCACTAGACACTTGCAGCTTCAGCTAGGTCAAGTGTCCCTCATTCCACTCCAACAACCGTCTTCTACTACTGCTACTACTTCTTCCGCAGTTTCTTGCTTCCAGAACCTTCTAGATGCAGAAGCTCCCAATGCGTCTTCCTCTCGCGTGGCGCTCATCGACAACGCTGCCGCCGCCGCCGCCGACGACAGAGACTGTATTCTCAGCCAGGATTTCTTTTGCACTCCGGATTACATAACTCCGGATAACCAGAACGTTTTCAACGGCTTTGATTGCGATAGGGAAAATACGCCTTGTCCCAAATCGCCGGAGAAGCTCAACACTACCAAAAGCAAGAGATGCCGACCTGATGCTATGTCAGTACACCCTCTCAGCCCTACCTTCTGTAGTGACCATCAACCAGTTGTGGAACTTGGAAAGGACTCTGGTACCGAAGAACTGGCTCTTGAGAAAACAATAGCACCTGGAAAACCAAAGGCTCAAAATTATGTGTCACATTCTGCAGTTGCATTGCGTTGCAGGGTTATGCCTCCTCCTTGCTTTAGGAACCCCTATTTAAAAGACGTATCAGACAAGGATTTAGATCCTTTTGGAAACCAAAGATTGAAATGTGCAGGTCTCTTCCCTGCATTTACTGGTGGTGATGGGCTTTCACGCTACCGCGCTGACTTTCATGAAATTGAGCAAATTGGCAGAGGGAACTTTAGTAGTGTTTTCAAAGTATTAAAACGAATAGATGGTTGCTTGTATGCTGTGAAGCACAGCACCAGACCATTACGCCTGGAAACAGAAAGGACAAAAGCTTTGATGGAAGTTCAAGCTTTGGCAGCCCTAGGTTTGCATGAGAATATTGTGGGCTACTATTCTTCATGGTTTGAAAATGAACAACTGTACATTCAGATGGAGCTATGTGATCACAGCTTATCTATAAGAAAATACTCCGCTTTATTTACAGAAGGACAAGTGTTAGATGCCTTATTTCAGGTTGCCAATGCACTGCAATTTATACACGAGAAGGGAATAGCTCATCTAGATGTCAAACCTGATAATATTTATGTGAAAAATGGTGTTTACAAGCTTGGTGATTTTGGATGTGCAACTCTTCTTGATAGTAGCCTGCCAATTGAGGAGGGCGACGCACGTTATATGCCCCAGGAAATCCTTAATGAGAATTATGATCACCTTGACAAGGTTGATATCTTTTCCTTGGGAGCTTCTATTTATGAACTAATTCGTAGGTTGCCTTTGCCAGAATCAGGATGTCAATTTTTTAATCTTAAAGAGGGCAAGTTTCCCCTTCTGCCTGGTCATTCGTTGCAACTTCAAAACTTGCTCAAGGTCATGATGGACCCTGATCCGGTGAAGCGGCCTTCTGCTAAAGAATTGATAGAGAATCCAATTTTTTGTAGGATTCAAAGAACAGCAAGTTGA 1518 0.4394 MVKMKGKSQSQRIGKKSRKMKGALSTTTNTTRHLQLQLGQVSLIPLQQPSSTTATTSSAVSCFQNLLDAEAPNASSSRVALIDNAAAAAADDRDCILSQDFFCTPDYITPDNQNVFNGFDCDRENTPCPKSPEKLNTTKSKRCRPDAMSVHPLSPTFCSDHQPVVELGKDSGTEELALEKTIAPGKPKAQNYVSHSAVALRCRVMPPPCFRNPYLKDVSDKDLDPFGNQRLKCAGLFPAFTGGDGLSRYRADFHEIEQIGRGNFSSVFKVLKRIDGCLYAVKHSTRPLRLETERTKALMEVQALAALGLHENIVGYYSSWFENEQLYIQMELCDHSLSIRKYSALFTEGQVLDALFQVANALQFIHEKGIAHLDVKPDNIYVKNGVYKLGDFGCATLLDSSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGASIYELIRRLPLPESGCQFFNLKEGKFPLLPGHSLQLQNLLKVMMDPDPVKRPSAKELIENPIFCRIQRTAS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01949 505 Gene3D Phosphorylase Kinase; domain 1 244 331 - -
Gma03g01949 505 Gene3D Transferase(Phosphotransferase) domain 1 332 501 - -
Gma03g01949 505 Pfam Protein kinase domain 253 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01949 505 SUPERFAMILY Protein kinase-like (PK-like) 247 501 IPR011009 -
Gma03g01949 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 370 382 IPR008271 GO:0004672|GO:0006468
Gma03g01949 505 MobiDBLite consensus disorder prediction 1 31 - -
Gma03g01949 505 SMART serkin_6 253 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01949 505 PANTHER BNAA08G27310D PROTEIN 63 411 - -
Gma03g01949 505 PANTHER BNAA08G27310D PROTEIN 424 501 - -
Gma03g01949 505 ProSiteProfiles Protein kinase domain profile. 253 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01949 505 ProSitePatterns Protein kinases ATP-binding region signature. 259 282 IPR017441 GO:0005524
Gma03g01949 505 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 63 411 - -
Gma03g01949 505 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 424 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01949 Gma-Chr3 45311071 45314505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01949 12 501 Core Cell Cycle Gene Families AT1G02970 60.446 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Gma03g01949 Pkinase 4.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01949 K06632 - gmx:547742 1003.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01949 03 45311071 45314505 Gma03g01949 03 45311071 45314505 ECH