Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01945 ATGGATGCGTGGAACGAAGATTTTTCGGAGCTGGAGATTGGGAGCTCCACTGAATCGTTCCAGAAGTTTTTGGTTTCGCAGAGAGAGCTTTTCCACAGCCAGATCGATCAGTTTCAGGAAATCGTCGTCACGCAATGCAAACTCACCGGCGTCAATCCTCTCTCTCAGGAAATGGTGCGCTCCTTTTGTTTTCGAAAAAGACCGAGGGATTTATTGAATCCAAAGGCTGTAAATTACATGCAATCTGTTTTTTCCATTAAAGATGCTATTAGCAAGAAGGAATTGCGCGAGATTAGTGCTTTACTCGGTGTTACAGTGACACAGGTGCGTGACTTTTTCAATGCTCAACGTTCAAGAGTGAGGAGATCCGTGCAGTTGTCAAGGGAGAGGGCACTGAGTTCTAATTCTTGTGAAGAACCTCATGATGATCAAATAAACTCTGATCCTATGAGACCAATAAATCCAACTCCCTTAAACTCTGCTGGCCTGTCCAATACTGAAGAAGCATCTTGTTCAACACAGGAAGTGACTTTGTCTGACCTAGATGACTCAGATAAACAATTTGTTGATAGCATTTTTAGTTTAATGCAAAAAGAGGAGACATTTTCTGGGCAGGAGAAATTGATGGAGTGGATATTGACGATACAGAATTTTTCAGTATTGTTGTGGTTTTTGAGCAGAGGGGGTGGAATGAATTTAGCAACTTGGTTGAGCAAGGCAGCTGTTGAAGAGCAAACAAGTGTCCTTCTTCTTGTTTTGAAGGTTCTTTGTCATTTGCCTTTACATAAAGCTGTTCCCATGCACATATCAGCTATATTGCAGAGTGTAAATAAACTACGGTTCTACAGGACATCAGGATCAGACATATCAAACAGGGCAAGGGTTTTGTTGTCAAAGTGGAGCAAACTATTTGCAAGGAACCATGTAATAAAGAAGCCCAATGGTGTTAAGACTTCTAGTGATGGTCATAAAGAGATGATGCTTTCTCGGAGGCAAGCTTGCATTTTATCTCTTTTCTGTGCACAATTTGTTGGGACCTCCTTTCTCAATTATTGTGATTTATATTTTTGCAGTATTGGTCAACTTATGGGCTCTGAATCATGGCATTCAAATATTGATGTTCCTGTAATTGTGAAAATGCTCCATTTTGTTTCTTCTCTGTTCAGGAAAATAGGATCTCCACAAGGTGTGAAATTGTTGCCTCCCAGCTTGGATAATTCTAATAAAAAGTCCACTCTTGGTGTATCTTCATCTCAATCTAGAGAACGCAGAAAAGTGCAATTGGTGGAACAGCCGGGCCAAAAGTCAGTGAGCAGAAGCTCACAAGTGACGAGAGCAGGGCCTGTAAGTCAAGGCCGTCCCATGTCTGCTGATGATATTCAGAAAGCAAAAATGCGTGCTTTATTTATGCAGAGTAAGTATGGGAAATCTGGTTCAAAAGAGAGTAGCGAAACAAAAATTGATAGCCCATATAAACAACCTCAGACAAACCCCGCCAGTATTGCAGCTTGCTCTTCTAAAGTTCCTACTCCACCCAAAATTGAAGAAAACGAGAAACCTTTGTTACTTGCCTCTAAAGCCACTAATAAGCTGGAAGCTTCTTATTCAAAACCAAAAATGGATGTGAAGGAACCTCTCTGGGAGAAGTGCAAGAGGGTTCAGATCCCATGGAAAACACCAGCAGAAGTGGAACTTAAAGATACCTGGAGAGTTGGTGGCGGTGAAAATAGCAAAGAGGTTGAGGTCCAGAGAAACAGAAACCGCAGGGATAAGGAAATTATATACAAAACTGTCCAAGAGATGCCACCTAACCCCAAGGAGCCTTGGGACCTTGAAATGGACTATGATGATACTTTGACGTTGGAAATCCCTATTGAACAGCTACCAGATGGTGATGCAGATATAGCAATTTCCCCCAATCATGTTGCAACTCATAGTGTTCAAGGGGTGGCCTCCACTTCTTCAACCAGTGTGGCTACTGCTGAACCTGATTTAGAATTGCTTGCTGTGCTGTTAAAAAATCCAGAGTTGGTGTTTGCCTTAACTTCTGGACAAGGTGGTAGCATACCGAGCGAAGAAACCGTGAAGCTGCTTGACATGATCAAGAGTGGAGGTGTGAACTTGGGTTTAAGTGAAAATACAAATGGAAGTTATGGCACGAGTGTAAAGGCCCCGGAGAAGGTGGAAGTTTCTCTTCCATCTCCAACCCCCTTAAGCGATCCAAGAACGAGTGGATGGAGCTCAGAAGCATCAAAAAATCCCTTTTCAAGGCAAAGTCTAGCACCCGATAGAATTACACAGAAACATACTGCAGTGGCAACTACCAACTTATTATCTCAGATTCCTATAACTGTCACTACAGTAAGGCAACAACCAACAGTTGTGGTTCCATCTTCGAGGCATCTTACAAGCATATCAGTTTCTCCATATTCACTGCCTCAAGCAACTAATGTTATTCCTGAAAAGCCACCGCCCCTGGGGCATGTACAAACATCCTCAGATGTAGGTTTAACCATGAAGAAGAACTTAATCACTGCAAATGCATCTTCAGTTAACTTTACTGGCACACATTCAACTCTAGCAATGCGGGGTGATGGCACCAATTATGTAAAACCTGTACCTAATTTGAGTGTGCAACATGAGGGTTTGTCTAATTCATTCCCACAACCCTTCATGCCACCCTCACCAACACCATCCCATTCAGCCTCACAGCAACAAAGACATCAACATTTGGCCCAGGAAGTCCATTACACTGAACCTCCATATCGTAACCCTGGCCGTTCCTACCCGCCACAAATCGAAAAATCAGATCACGGGTCTGATAATATGTGGAGAGTTAGGCAGGATCATGTGTCATCTAGTTATCTTTCTCAACGAAACCATAACAACAACTATAACACAATTGTTGGGGGATCCAGACAATCTGGTTTTTATGATAGAAATAATCATGCAAGGGGAGAATTTGAATCATGGAGTCCGGAAAATAGTCCAACTAGAAATCCTAGGTATGCACCAGGTAGAAATTACCCAGAGTCCAGAATGAATCATGGTAGAAATCATAGACCTGAATGGTCAAGGCAGAGGGGTTCTTCTGGACACTGGGACCCTGGCAGACAGGGAAACAGAAAGTGGCATGATCAGAGACGATGA 3150 0.4263 MDAWNEDFSELEIGSSTESFQKFLVSQRELFHSQIDQFQEIVVTQCKLTGVNPLSQEMVRSFCFRKRPRDLLNPKAVNYMQSVFSIKDAISKKELREISALLGVTVTQVRDFFNAQRSRVRRSVQLSRERALSSNSCEEPHDDQINSDPMRPINPTPLNSAGLSNTEEASCSTQEVTLSDLDDSDKQFVDSIFSLMQKEETFSGQEKLMEWILTIQNFSVLLWFLSRGGGMNLATWLSKAAVEEQTSVLLLVLKVLCHLPLHKAVPMHISAILQSVNKLRFYRTSGSDISNRARVLLSKWSKLFARNHVIKKPNGVKTSSDGHKEMMLSRRQACILSLFCAQFVGTSFLNYCDLYFCSIGQLMGSESWHSNIDVPVIVKMLHFVSSLFRKIGSPQGVKLLPPSLDNSNKKSTLGVSSSQSRERRKVQLVEQPGQKSVSRSSQVTRAGPVSQGRPMSADDIQKAKMRALFMQSKYGKSGSKESSETKIDSPYKQPQTNPASIAACSSKVPTPPKIEENEKPLLLASKATNKLEASYSKPKMDVKEPLWEKCKRVQIPWKTPAEVELKDTWRVGGGENSKEVEVQRNRNRRDKEIIYKTVQEMPPNPKEPWDLEMDYDDTLTLEIPIEQLPDGDADIAISPNHVATHSVQGVASTSSTSVATAEPDLELLAVLLKNPELVFALTSGQGGSIPSEETVKLLDMIKSGGVNLGLSENTNGSYGTSVKAPEKVEVSLPSPTPLSDPRTSGWSSEASKNPFSRQSLAPDRITQKHTAVATTNLLSQIPITVTTVRQQPTVVVPSSRHLTSISVSPYSLPQATNVIPEKPPPLGHVQTSSDVGLTMKKNLITANASSVNFTGTHSTLAMRGDGTNYVKPVPNLSVQHEGLSNSFPQPFMPPSPTPSHSASQQQRHQHLAQEVHYTEPPYRNPGRSYPPQIEKSDHGSDNMWRVRQDHVSSSYLSQRNHNNNYNTIVGGSRQSGFYDRNNHARGEFESWSPENSPTRNPRYAPGRNYPESRMNHGRNHRPEWSRQRGSSGHWDPGRQGNRKWHDQRR 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01945 1049 Gene3D - 64 125 - -
Gma03g01945 1049 MobiDBLite consensus disorder prediction 131 166 - -
Gma03g01945 1049 MobiDBLite consensus disorder prediction 736 757 - -
Gma03g01945 1049 ProSiteProfiles 'Homeobox' domain profile. 63 123 IPR001356 GO:0003677
Gma03g01945 1049 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 1049 - -
Gma03g01945 1049 MobiDBLite consensus disorder prediction 400 422 - -
Gma03g01945 1049 CDD homeodomain 66 123 IPR001356 GO:0003677
Gma03g01945 1049 MobiDBLite consensus disorder prediction 149 166 - -
Gma03g01945 1049 MobiDBLite consensus disorder prediction 879 939 - -
Gma03g01945 1049 MobiDBLite consensus disorder prediction 952 979 - -
Gma03g01945 1049 MobiDBLite consensus disorder prediction 431 449 - -
Gma03g01945 1049 MobiDBLite consensus disorder prediction 1013 1028 - -
Gma03g01945 1049 MobiDBLite consensus disorder prediction 712 757 - -
Gma03g01945 1049 MobiDBLite consensus disorder prediction 488 504 - -
Gma03g01945 1049 MobiDBLite consensus disorder prediction 988 1002 - -
Gma03g01945 1049 MobiDBLite consensus disorder prediction 399 457 - -
Gma03g01945 1049 PANTHER HOMEOBOX PROTEIN LUMINIDEPENDENS 1 1049 - -
Gma03g01945 1049 MobiDBLite consensus disorder prediction 472 513 - -
Gma03g01945 1049 SUPERFAMILY Homeodomain-like 66 129 IPR009057 -
Gma03g01945 1049 MobiDBLite consensus disorder prediction 952 1049 - -
Gma03g01945 1049 SMART HOX_1 65 127 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01945 Gma-Chr3 45274690 45282586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01945 546 773 Homeobox Transcription Factor Family AT4G02560 48.684 6.96e-48 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gma03g01945 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01945 - - gmx:100780237 1904.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01984 19 48907130 48915996 Gma03g01945 03 45274690 45282586 GST