Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01941 ATGGTGACTGATAGACAATCTGTTGCTTTAGCACAAGCTTTCAAGATGGCTCGAAGATACTCGCCAGCAATACTTCTTCTTTGTCATTTTGGTGTTTTTCATGATTCACAATCGCCTGAGGTTTCACCACATGACCAAAGAGGAAATACATCTGAAGTTGCATCAGTTATTAGGAAATTCACTGAGCCAAATTGCAAAGATTTTTACTTTTACAGCATGTTGGTGAAGGTGGAGAAGAAGAATGCTGAAAAGACAAGTGGGCATCAGGTCCTGTTGGTTGCTGCTGCTGACAGTTCAGAAGGTCTGCCTCCAACTATCAGACGCTGTTTTAGCCATGAAATAAGCATGGGGCCTTTGACTGAAGAGCAAAGGGCTGAAATGCTATTCCAGTCACTGCAAAGTGTTTCCGGACTCCTCTCTAATACTGATTCAGAAGCTTTAGTAAAAGAAATAGTTGGACAGACATCTGGTTACATGCCCAGGGATATATGTGCTTTGATTGCAGATGCTGGTGCCAACTTATTTCCCAGAAACAATGCTAAAGTAGACAAAGATGTGCCTGATGATGTAGGTAGTTCCTTAAGTTCCAAGGTGGCAGAGGACAACAATCAACGGAAAGTTTCACCTCTGATTACTGGGAAAGAAGACTTGTTGAATGCTCTGGAACGATCAAAGAAAAGAAATGCATCAGTGTTGTGTACTCCAAAGGTTCCGAATTTGAAATGGGAAGATGTTGGTGGGCTTGAAGATATCAAAAAGTCAATCCTGGATACTGTTCAGTTACCTCTCCTGCATAAAGATCTATTTTCATCTGGATTACGTAACGTGAAAGGTCCTGAACTGATCAACATGTACATTGGAGAGTCTGAAAAGAATGTTCGAGACATTTTCCAGAAGGCCAGATCAGCATGTCCATGTGTCATCTTCTTTGATGAGTTTGATTCTCTTGCACCAGCTCGGGGTGCTTCTGGAGATTCTGGGAGCGTTATGGACAGAGTGGTTTCTCAGATGCTTGCAGAGATTGATGGCTTAAGTGATTCAACACAGACCCGGCGTCGATTTGATAAACTGCTATATGTTGGAGTTAACTCTGATGCATCTTACAGGGAGCAGGTCCTGAAAGCTCTTACCCGAAAGTTTAAATTGCATGAAGATGCCTCACTTTACTCCATAGCAAAAAAATGTCCACCAAACTTTACTGGTGCAGACATGTATGCTTTGTGTGCAGATGCTTGGTTCTATGCTGCAAAGCGCAAAGTAGTTTTGAGTGAAAATTCGGAGTCTTCCAGCCAAGACAATGAAGCAGATTCTGTTGTTGTTGAATACAATGATTTTGTCCGGGTCTTAGAAGAACTGTCGCCTTCCCTCTCGATGTCCGAGCTCAAGAAGTACGAGCAAATGAGAGATCAGTTTGAAGGCACCTCTAAATGA 1431 0.4242 MVTDRQSVALAQAFKMARRYSPAILLLCHFGVFHDSQSPEVSPHDQRGNTSEVASVIRKFTEPNCKDFYFYSMLVKVEKKNAEKTSGHQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEEQRAEMLFQSLQSVSGLLSNTDSEALVKEIVGQTSGYMPRDICALIADAGANLFPRNNAKVDKDVPDDVGSSLSSKVAEDNNQRKVSPLITGKEDLLNALERSKKRNASVLCTPKVPNLKWEDVGGLEDIKKSILDTVQLPLLHKDLFSSGLRNVKGPELINMYIGESEKNVRDIFQKARSACPCVIFFDEFDSLAPARGASGDSGSVMDRVVSQMLAEIDGLSDSTQTRRRFDKLLYVGVNSDASYREQVLKALTRKFKLHEDASLYSIAKKCPPNFTGADMYALCADAWFYAAKRKVVLSENSESSSQDNEADSVVVEYNDFVRVLEELSPSLSMSELKKYEQMRDQFEGTSK 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01941 476 Gene3D - 119 188 - -
Gma03g01941 476 PANTHER PEROXISOME ASSEMBLY FACTOR 2 4 274 - -
Gma03g01941 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 199 IPR027417 -
Gma03g01941 476 Gene3D - 276 465 IPR027417 -
Gma03g01941 476 PANTHER AAA-FAMILY ATPASE 4 274 - -
Gma03g01941 476 PANTHER AAA-FAMILY ATPASE 275 472 - -
Gma03g01941 476 CDD AAA 264 354 - -
Gma03g01941 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 238 470 IPR027417 -
Gma03g01941 476 Gene3D - 363 450 - -
Gma03g01941 476 Pfam ATPase family associated with various cellular activities (AAA) 272 347 IPR003959 GO:0005524|GO:0016887
Gma03g01941 476 Gene3D - 217 275 IPR027417 -
Gma03g01941 476 Gene3D - 11 118 IPR027417 -
Gma03g01941 476 PANTHER PEROXISOME ASSEMBLY FACTOR 2 275 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01941 Gma-Chr3 45233014 45237850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01941 275 430 Calmodulin-binding Proteins AT3G56690 32.759 1.27e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01941 K13339 - gmx:100820183 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01981 19 48866382 48873262 Gma03g01941 03 45233014 45237850 GST
Gma10g00439 10 4239372 4239797 Gma03g01941 03 45233014 45237850 PCT
Gma13g01145 13 25639190 25639967 Gma03g01941 03 45233014 45237850 PCT