Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01897 ATGGACAATCAGAAGGGAACGAGTATTAGTTTTGAGACATTCACGTGGAAAATTGAAAATTTCTCAAAACAGAACACCAAGAAACTACAATCCAAGGCTTTCCGAATCCGAGGTTATAAATGGCGGATTCGTTTGTATCCAATAATGAAGAATGTTGACCATTTTTCATTATATTTGATGATTGCGGATTCTTTACCTCCGTATGGATGGAACAGAAATACGTATTTCAAGTTGGCTCTAGTTAATCAATTGGATGTCAATAAGTCAGTTGTAAAGGAGACTCAGCAGAAGTTCAATGGTGGATATCGTAGCTGGGGCTCATCTTTTGTGAATCTTAGTGACTTCTATGACTCTAAACAAGGCTATCTTGTGAATGACACATGCATCATTGAAGCTCATGTTTGTGTCTCAGATCTTAGCACTCTTGAAGTTGAAGCTAACAATTTGAACAAAATCACTCCAACCAAAGACTCTAAATTAGGTGATCAAGCAGCAAGTAATTCAGAATCCACACAGCAGGAAGATGATAAAGAAACAGAAACAGAAATATCAGATGAGAGTGAGACACTTAGTTCTTCAACCTGTGGGTCTAGTCAAACAGAAGGGGAAGTTCAAAGTTCAGATTTGACACTAAAAGACCTTTTAGATTTGGCGAGTTTAGGAAAAGAAGAGGCTGCTTTTGTTCCACTGTTGGAGGAGGCATGCATATGGCATCCTTCCCTGATAAGGAGCCAGAGGAAAAGTTCAAGATGGTTTAAACTATGGGCATTCACATCTTTGGGCCAAGTTCTGCATTTACTCAAGACAAGTAAGGTGAAGGATATGAATGAAGATGCATGCAATCGCCTTCGAGGTTTATGGGAAGAACTTGTTAAGCACTCCGGATTTCAATTGTCTTGGTTGGAGCCTTATGTTCAATCTGCATTGGGTATGGAAGCTCATTTGGATAAAACAGGTGAAGTGAATAAACTCAAAGACAGTGTGGTTGCTTTGGAGATTAAAATGAAGAAGCTGAGGGGAGAATTGGAAGCTGCAGAAGCTGAGTTTGAGCGCATTGCATATATAGTGATTAGTGAACTTGATTTTTCTCATAAGTTCCATTTCCTTGCAAATTATGGTGGGAAATGCCTTGGGTGCCCGCTGCTAATACTTCTCTGTATGTTTGATACTTACAATATGGGTGGCCGGTTGAAACTAAAGCTCGTGCGATGGACCTTAAGCACAATCATGCGAGGTCGGATCTACAACGAGGAGGTCAGATCTGGCGGTGGAGGTGTCATACTCCACGGTAGAGGGGCGGCGGAGGGTGGTGGTGGTTATTGTGGAGGGGTGCAACACGGAGGATggtga 1350 0.4133 MDNQKGTSISFETFTWKIENFSKQNTKKLQSKAFRIRGYKWRIRLYPIMKNVDHFSLYLMIADSLPPYGWNRNTYFKLALVNQLDVNKSVVKETQQKFNGGYRSWGSSFVNLSDFYDSKQGYLVNDTCIIEAHVCVSDLSTLEVEANNLNKITPTKDSKLGDQAASNSESTQQEDDKETETEISDESETLSSSTCGSSQTEGEVQSSDLTLKDLLDLASLGKEEAAFVPLLEEACIWHPSLIRSQRKSSRWFKLWAFTSLGQVLHLLKTSKVKDMNEDACNRLRGLWEELVKHSGFQLSWLEPYVQSALGMEAHLDKTGEVNKLKDSVVALEIKMKKLRGELEAAEAEFERIAYIVISELDFSHKFHFLANYGGKCLGCPLLILLCMFDTYNMGGRLKLKLVRWTLSTIMRGRIYNEEVRSGGGGVILHGRGAAEGGGGYCGGVQHGGW 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01897 449 MobiDBLite consensus disorder prediction 186 204 - -
Gma03g01897 449 Pfam MATH domain 18 135 IPR002083 GO:0005515
Gma03g01897 449 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 10 158 IPR008974 GO:0005515
Gma03g01897 449 SUPERFAMILY TRAF domain-like 13 137 - -
Gma03g01897 449 SMART math_3 13 115 IPR002083 GO:0005515
Gma03g01897 449 MobiDBLite consensus disorder prediction 152 204 - -
Gma03g01897 449 ProSiteProfiles MATH/TRAF domain profile. 11 134 IPR002083 GO:0005515
Gma03g01897 449 Coils Coil 321 348 - -
Gma03g01897 449 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 351 - -
Gma03g01897 449 CDD MATH 13 134 IPR002083 GO:0005515
Gma03g01897 449 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 351 - -
Gma03g01897 449 MobiDBLite consensus disorder prediction 152 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01897 Gma-Chr3 44887745 44889844 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01897 - - gmx:102664376 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01938 19 48536858 48538460 Gma03g01897 03 44887745 44889844 GST
Gma03g01897 03 44887745 44889844 Gma10g01176 10 33686508 33713340 PCT
Gma03g01897 03 44887745 44889844 Gma20g00704 20 27113331 27181382 PCT
Gma10g00810 10 11863855 11868034 Gma03g01897 03 44887745 44889844 PCT
Gma02g01544 02 30839745 30841316 Gma03g01897 03 44887745 44889844 PCT