Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01890 ATGGGTTCCCTCCCTCACGTAGTAGAGGACTGCATGGGCTTCCTCCAACTTTATAGCGACGGTTCCATTTTCCGTTCCAACGACATAGAATTCAAAGTTTCACCCATTCAAGACAACTCCATAACCTATAAAGATTATCTCTTTGACAAGAGATTCAACCTTTCTCTTCGCTTCTACAAGCCCCAACACGTAGCACCCATAGACAATAACAAGAAGCTTCCTATTGTGATGTTCCTTCACGGTGGAGGCTTTTGCTTCGGTTCGCGCACGTGGCCCCATATTCACAACTGTTGCATGCGCCTCGCGTCGGGGCTCCAAGCGGTGGTGGTTTCGCCGGACTACCGTCTGGCGCCGGAGCACCGTCTTCCGGCCGCAGTAGACGACGCCGTGGAGGCGGTGAGGTGGCTCCAGAGGCAGGGGCTGAGCTTGAAGGAGGACGCGTGGTTGAGTGGGGGCGTTGACTTTGATTGCGTGTTCGTGGTGGGTGACTCGTCTGGCGGGAACATTGCGCACCACCTGGCGGTTCGGTTGGGGTCCGGTTCGAGAGAGATGGACCCGGTTCGGGTACGAGGTTACGTGTTGTTTGCTCCGTTTTTTGGCGGGGAGGTTCGGACCAAGTCCGAGGAAGGTCCACCAGAGCACATGTTGAACCTCGAGTTATTAGACAGATTTTGGAGGCTGTCGATGCCTGTTGGAGAGAGCAGAGACCACCCATTGGCGAATCCGTTCGGACCTGGAAGCCCAAATCTTGAACAAGTGAAGCTTGATCCTATTTTGGTAATAGTAGGTGGCAATGAATTGCTCAAGGATAGGGCAAAAAACTATGCAACAAGGTTAAAAAAATTAGACAAGGACATTAAATACGTTGAGTTTGAAGGGTGCGAGCATGGGTTTTTCACGCATGATTCATTCTCATCAGAAGTTACAGAAGAGGTCATCCAAATCCTTAAAGGATTCATGCTTGCAAACTTCTAG 975 0.5097 MGSLPHVVEDCMGFLQLYSDGSIFRSNDIEFKVSPIQDNSITYKDYLFDKRFNLSLRFYKPQHVAPIDNNKKLPIVMFLHGGGFCFGSRTWPHIHNCCMRLASGLQAVVVSPDYRLAPEHRLPAAVDDAVEAVRWLQRQGLSLKEDAWLSGGVDFDCVFVVGDSSGGNIAHHLAVRLGSGSREMDPVRVRGYVLFAPFFGGEVRTKSEEGPPEHMLNLELLDRFWRLSMPVGESRDHPLANPFGPGSPNLEQVKLDPILVIVGGNELLKDRAKNYATRLKKLDKDIKYVEFEGCEHGFFTHDSFSSEVTEEVIQILKGFMLANF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01890 324 Gene3D alpha/beta hydrolase 17 321 IPR029058 -
Gma03g01890 324 PANTHER CARBOXYLESTERASE 15-RELATED 4 321 - -
Gma03g01890 324 Coils Coil 265 285 - -
Gma03g01890 324 SUPERFAMILY alpha/beta-Hydrolases 4 317 IPR029058 -
Gma03g01890 324 Pfam alpha/beta hydrolase fold 76 299 IPR013094 GO:0016787
Gma03g01890 324 PANTHER ARYLACETAMIDE DEACETYLASE 4 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01890 Gma-Chr3 44839902 44842942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01890 7 305 Carbohydrate Esterase AT5G16080 34.967 5.57e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01890 - - gmx:100803077 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01890 03 44839902 44842942 Gma03g01890 03 44839902 44842942 ECH
Gma19g01929 19 48484117 48487173 Gma03g01890 03 44839902 44842942 GST
Gma03g01890 03 44839902 44842942 Gma10g00803 10 11548129 11554664 PCT
Gma03g01890 03 44839902 44842942 Gma02g01532 02 30563485 30568637 PCT
Gma10g00803 10 11548129 11554664 Gma03g01890 03 44839902 44842942 PCT
Gma02g01532 02 30563485 30568637 Gma03g01890 03 44839902 44842942 PCT