Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01884 ATGGGGAAATTTGCTACTTTTATAGAATATTTTCCGGCTGTCATGTCTGACTTGCTACAAATCGTGTTAAAAGTCGAGCGATGTCACGAGCTATCATTTTTGACGTCGGAGTCCTCCTCCTCCACCGACACGCTTCCGCCGTTCGCCTCTAACGACACCTTGCAAAACTCACCGTTTCTCCACTCAAAAACTCCTCGCCTAGGGAAGGCACGTAGCAAGTGCTCACGCGCAGCATCGGGGGACTGGTCCACGCGCCTGCTCCACTTGGTCACGCTAGAGCAGGTGAAGCCGCCGCAGGCGAATAAGAGAGAGGGAATGAATGTGGAGTGTTTCGGATGCAAATGCCTTCACTGTGGCACGGAGAAGACGCCGCAGTGGCGAACGGGATCAATGAGACCGAAAACTCTATGCAACATGTTCGACATGAGGTTCAAGTCCAGGAGGCTGGTGCCAGAATACTGCCCGACAGCGAGTCCAACGTTCATGTCAACGAAGCATTTGAATTCGCATCGAAAGGTTTTGGAGCTCAGGTGGCAGAAGGAGATGCAACGATAA 555 0.5207 MGKFATFIEYFPAVMSDLLQIVLKVERCHELSFLTSESSSSTDTLPPFASNDTLQNSPFLHSKTPRLGKARSKCSRAASGDWSTRLLHLVTLEQVKPPQANKREGMNVECFGCKCLHCGTEKTPQWRTGSMRPKTLCNMFDMRFKSRRLVPEYCPTASPTFMSTKHLNSHRKVLELRWQKEMQR 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01884 184 PANTHER GATA TRANSCRIPTION FACTOR 9 34 184 - -
Gma03g01884 184 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 112 172 - -
Gma03g01884 184 PANTHER GATA TRANSCRIPTION FACTOR 34 184 - -
Gma03g01884 184 Pfam GATA zinc finger 115 138 IPR000679 GO:0006355|GO:0043565
Gma03g01884 184 MobiDBLite consensus disorder prediction 37 62 - -
Gma03g01884 184 SMART GATA_3 109 159 IPR000679 GO:0006355|GO:0043565
Gma03g01884 184 Gene3D - 111 183 IPR013088 GO:0006355|GO:0008270
Gma03g01884 184 MobiDBLite consensus disorder prediction 37 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01884 Gma-Chr3 44797602 44798934 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01884 68 183 C2C2-Gata Transcription Factor Family AT4G32890 53.543 2.57e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Gma03g01884 GATA 1.1e-07 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01884 - - gsj:114405309 286.574