Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01883 ATGGAAAATGCAAGTACGTCGTCTAGCTTAGCGAGAACGAAATCGGATCAGCTAGCAGTGGAGACGGTGGCAACGACAGCTGAGAAGTCGCCACCGTCGGCGGAGGGCGGTGGAGCCCTGTCAAGGAAATCGAGCTGGAGGATGACGGCGGCGCCATCGCCGGGTGGCGGCGGTGGTGGGAGAAACACATACATAAGGAAGGCAAGGAGCGCTCAGTTGAAGGTTGAGGTGGACGAGGTTGGCAGCGGCGTGGCTCTTAGCCGAGCTTCCAGCGCCAGCTTGGGCCTCTCATTCTCCTTCACCGGCTTCACTCTCCCTCCTGATGAAATCGCCGATTCCAAACCATTCAGCGACGATGATATCCCGGAGGATATTGAAGCTGGAACTCCTAAGCCAAAGTTTCAGACGGAACCTACTCTGCCAATATATCTAAAGTTCACAGATGTAACCTACAAGTTAGTGATGAAAGGCATAACTACAACTAAGGAGAAGGATATCTTGAAGGGGATCACTGGTTCTGTAAATCCTGGGGAAGTTTTAGCATTGATGGGTCCTTCAGGAAGTGGAAAGACATCTTTGTTAAATCTGCTAGGAGGAAGGTTGATTCAATGCACAATTGGTGGCTCTATCACTTACAATGATCAACCTTATTCCAAGTTCCTAAAGAGCAGGATTGGATTCGTGACACAAGATGATGTTCTGTTTCCTCACCTTACTGTAAAAGAAACATTGACTTATGCAGCCCTCCTAAGATTGCCAAATACATTAAGGAAAGAGCAAAAGGAAAAACGAGCTTTAGAAGTCATTGAAGAGCTGGGATTGGAGAGGTGCCAAGACACTATGATAGGAGGTTCCTATGTTCGAGGAATATCTGGTGGAGAGAGGAAGCGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCACTTCTGTTTCTTGATGAACCAACTTCTGGTTTGGATTCTACAACAGCCTTGAGGATAGTTCAGATGCTACAAGACATAGCAGAGGCTGGTAAAACCGTAGTGACAACAATCCATCAACCGTCAAGCAGACTCTTTCATAAATTTGATAAGTTGATCCTTCTAGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCTGATGCCATGGACTATTTCCAGTTTATAGGGTGTGCACCTCTTATTGCCATGAACCCAGCAGAGTTTTTATTAGACCTTGCAAATGGAAACGTAAATGATATTTCTGTGCCATCAGAGTTAAAGGATAAAGTGCAGATGGGAAATGCTGAAGCTGAAACATCCAATGGGAAACCATCAGCTTCAGTTGTACAAGAGTATCTGGTGGAGGCATATGATTCTCGAGTTGCAGAAATAGAGAAGACAAAGCTAATGATTCCTGTCCCCCTTGATGAAGAACTGAAGTCTAAGGTTTGTTCTTGTAAAAGACAGTGGGGAGCAAGTTGGTTTGAGCAATTTTCCATATTATTTTCTAGAGGATTCAGAGAACGGAGGCATGACTACTTTAGCTGGTTGAGAATCACCCAAGTTCTAGCCACTGCAGTCATCTTAGGATTACTCTGGTGGCAATCAGATGCTAAAACACCAAAAGGTTTGCAAGACCAGGCAGGACTGCTTTTCTTTATTGCTGTGTTTTGGGGATTCTTTCCTGTCTTCACTGCTATATTCACATTTCCTCAAGAGAGAGCTATGCTGACTAAGGAACGAACAACCGATATGTACAGACTAAGTGCATATTTCGTGGCCAGAACTACAAGTGACCTTCTACTAGACCTGGTGCTACCAGTGTTTTTCCTCCTTGTTGTTTATTTCATGGCCAATTTGAGACTCGGTTCAGGGCGTTTTTTCTTTAGTATTCTTACCGTTTTTCTCTGCATCATAGCAGCTCAGGGTCTTGGACTTGCTATTGGGGCTACACTAATGGACTTAAAAAGGGCAACAACTTTGGCTTCAGTAACTGTGATGACTTTCATGCTGGCTGGAGGTTTTTTTGTGAAGAAAGTCCCCATATTTATATCATGGATTCGCTACATATCTTTCAACTACCATACGTATAAACTTTTGCTCAAGGTTCAATATGAACACATTACACCTACCATTGATGGGATCAGAATTGACAGTGGATTCACAGAGGTTGCTGCTCTGACAGCCATGGTTTTTGGTTACCGTTTATTGGCATATCTTTCTTTGCGGCGGATGAAACTTCTAGCTGGAAATTAA 2223 0.4404 MENASTSSSLARTKSDQLAVETVATTAEKSPPSAEGGGALSRKSSWRMTAAPSPGGGGGGRNTYIRKARSAQLKVEVDEVGSGVALSRASSASLGLSFSFTGFTLPPDEIADSKPFSDDDIPEDIEAGTPKPKFQTEPTLPIYLKFTDVTYKLVMKGITTTKEKDILKGITGSVNPGEVLALMGPSGSGKTSLLNLLGGRLIQCTIGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAALLRLPNTLRKEQKEKRALEVIEELGLERCQDTMIGGSYVRGISGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASDAMDYFQFIGCAPLIAMNPAEFLLDLANGNVNDISVPSELKDKVQMGNAEAETSNGKPSASVVQEYLVEAYDSRVAEIEKTKLMIPVPLDEELKSKVCSCKRQWGASWFEQFSILFSRGFRERRHDYFSWLRITQVLATAVILGLLWWQSDAKTPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLTKERTTDMYRLSAYFVARTTSDLLLDLVLPVFFLLVVYFMANLRLGSGRFFFSILTVFLCIIAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKKVPIFISWIRYISFNYHTYKLLLKVQYEHITPTIDGIRIDSGFTEVAALTAMVFGYRLLAYLSLRRMKLLAGN 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01883 740 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 144 390 IPR003439 GO:0005524
Gma03g01883 740 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 29 734 - -
Gma03g01883 740 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 29 734 - -
Gma03g01883 740 Pfam ABC-2 type transporter 485 694 IPR013525 GO:0016020|GO:0140359
Gma03g01883 740 MobiDBLite consensus disorder prediction 1 63 - -
Gma03g01883 740 CDD ABCG_EPDR 141 372 - -
Gma03g01883 740 ProSitePatterns ABC transporters family signature. 290 304 IPR017871 GO:0005524
Gma03g01883 740 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 384 IPR027417 -
Gma03g01883 740 Pfam ABC transporter 167 318 IPR003439 GO:0005524
Gma03g01883 740 SMART AAA_5 176 367 IPR003593 -
Gma03g01883 740 MobiDBLite consensus disorder prediction 1 29 - -
Gma03g01883 740 Gene3D - 143 384 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01883 Gma-Chr3 44781089 44789880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01883 166 419 Calmodulin-binding Proteins AT2G36910 28.077 2.79e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01883 K05681 - gmx:100802030 1384.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01883 03 44781089 44789880 Gma03g01883 03 44781089 44789880 ECH
Gma19g01923 19 48424994 48434155 Gma03g01883 03 44781089 44789880 GST
Gma03g01883 03 44781089 44789880 Gma10g00796 10 11370733 11382047 PCT
Gma10g00796 10 11370733 11382047 Gma03g01883 03 44781089 44789880 PCT