Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01877 ATGGAATCTGAAAACAGGGTTGCTGTGGAGGTAGAGAAACGTATTATTGGGGTAACAACCAAGGTGGAGAATATAAAGAAAGAAGTAGAAAATGACTGTAATGGCGCAGAAATTCAGACTAAGAATGAAGTTTCTAAACCCACAGTGGATGCTAAAGGCCCCATTTCTGCTGGTGACAAAGTTGTAATTGAAGCCTCTAAAACTTCTGCAAATAAAAATTCAAAAGGTGCCAAGGAAACTGGTGGTAGAGCAAGTGTTGCTTCCAGGAGCAACAAATATGCCAAAGACAAACCCATTTTGAAGGGTCCAATTTCAATATCTCAAAAACTAAGGCCATCCCTTTCACAAAGCCTTTCTTTCCCAGCCAAATCAGCTGGTGAAGATGCTATGCAGAAAAGCATTGATGGGTATCTTGTGAAGCCAAAAGTTAGACATATTCAAGGTAATGGGATCAGAGGTGAGGGCCACATTCGTCATTTAAACAAGTCAACAAACTCTGAAGTCAACTCCCTGGCAAAAACCAACACTGGCATGCCTGCTTTGAAACGCTCTGCGTTTGGTAGGTCCACTACAGTTACTGCATTCACCAAGAGCCAAACTTCTGAGGCATCGTTACCCGTTGATCAGGTGTCAAGCACAGCAAAAACTGCAAAAGCAAATAAAGAGGATGATGATTCTCATTCCACAACTTCAAGTGCTACCCCTTGTCTGAGAAGCAATGGAAGTGGATTTTCCTTTAGATTGGAAGAAAGAGCTGAGAAGCGGAAGGAGTTTTTCTCAAAAATTATAGCCAAGGAAGCAGAGAAAACTAACCTACAAGTTAAATCAAAGGAAAACCAAGAGGCAGAGATCAAGCTATTGAGGAAGAGCATGGCATTCAAAGCAACTCCAATGCCAAGTTTCTATAAGGAACCACCTCCCAAAGTTGAGCTGAAGAAGATACCAACAACACGCCCAAGATCCCCAAAGCTTGGCAGGCACAAAGAACCTACTATGAACAACAATTCAGGAGAAGATAAGTCTTATCTTCGGACTTGA 1038 0.4191 MESENRVAVEVEKRIIGVTTKVENIKKEVENDCNGAEIQTKNEVSKPTVDAKGPISAGDKVVIEASKTSANKNSKGAKETGGRASVASRSNKYAKDKPILKGPISISQKLRPSLSQSLSFPAKSAGEDAMQKSIDGYLVKPKVRHIQGNGIRGEGHIRHLNKSTNSEVNSLAKTNTGMPALKRSAFGRSTTVTAFTKSQTSEASLPVDQVSSTAKTAKANKEDDDSHSTTSSATPCLRSNGSGFSFRLEERAEKRKEFFSKIIAKEAEKTNLQVKSKENQEAEIKLLRKSMAFKATPMPSFYKEPPPKVELKKIPTTRPRSPKLGRHKEPTMNNNSGEDKSYLRT 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01877 345 Pfam Targeting protein for Xklp2 (TPX2) domain 244 309 IPR027329 -
Gma03g01877 345 MobiDBLite consensus disorder prediction 297 345 - -
Gma03g01877 345 MobiDBLite consensus disorder prediction 328 345 - -
Gma03g01877 345 Coils Coil 265 285 - -
Gma03g01877 345 MobiDBLite consensus disorder prediction 197 242 - -
Gma03g01877 345 PANTHER PROTEIN WVD2-LIKE 4 1 341 IPR044833 GO:0008017
Gma03g01877 345 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 1 341 - -
Gma03g01877 345 MobiDBLite consensus disorder prediction 66 105 - -
Gma03g01877 345 MobiDBLite consensus disorder prediction 197 216 - -
Gma03g01877 345 MobiDBLite consensus disorder prediction 306 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01877 Gma-Chr3 44744318 44746840 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01877 - - gmx:100815009 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01917 19 48375549 48390122 Gma03g01877 03 44744318 44746840 GST
Gma03g01877 03 44744318 44746840 Gma10g00784 10 10595539 10599178 PCT
Gma03g01877 03 44744318 44746840 Gma02g01817 02 42130293 42134186 PCT
Gma10g00784 10 10595539 10599178 Gma03g01877 03 44744318 44746840 PCT
Gma02g01817 02 42130293 42134186 Gma03g01877 03 44744318 44746840 PCT