Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01876 ATGATGGGAAACAATTGTGTCGGATCAAAAACCTCAAATGATGCACTATTTCCCTATGTTCTTCCGGGTTCATTCTGGTGGCTTCATCAAACTAGTGTCACAGAAATTTCTGATGCACCTTCACTCGTGACTAAAATTCAAGACACAAATTTTCTAGAGAATGTTCAAGAAAACCCACCACAAGTAGTGAAAATTAACCACGAGGAGATGAAGCTGAAACCAACAGTTCCAAAACATGACAAAGAGACTAATATGCCTTCAGAGGAACAAACAAGGCACATGCAGAAAATGCCTCACAAAGTTAAGAGGCTACCAATAGGGCTTCAAGCAGAGTCAATTTTGAAGAGAAAAAATGGTAACTTTAAGGAGTACTATAACTTGGGACAAGAGCTTGGGAAGGGTCAATATGGAACAACATTCCTATGTACCGAGAAAGCCACAGGGAAAAACTATGCATGCAAGTCCATTCCAAAAGTGAAATTGGTTATGGATGATGATGTGGAGGATGTGAGGAGGGAGATTGAGATAATGCATCACTTAAAAGGGTGTCCTAATGTGATATCAATCAAAGGGGCTTATGAGGATGGTGTTGCTGTTTATGTTGTGATGGAATTGTGTGAAGGGGGTGAACTGTTTGATAGGATTGTGGAAAAGGGGCATTACACAGAGAGAAAAGCAGCAAAACTTGCAAGGACTATCGTTAGTGTTATAGAGGGGTGTCACTCCCTTGGAGTGATGCATCGGGATCTTAAGCCTGAGAATTTTCTTTTCGTTGATGGGAATGAAGAGTCCACCCTTAAAGCGATAGATTTTGGATTGTCTGTTTTCTTCAAACCAGGAGAAGTTTTTAAGGACGTGGTTGGAAGTCCTTATTATATCGCACCTGAAGTTCTACGTAGGCATTATGGTCCAGAAGCTGATGTGTGGAGTGCAGGTGTGATCATATACATTCTCTTATGCGGAACACCTCCATTTTGGGGTGAATCGGAGCAAGAGATATTTGAAGAAGTTTTGCATGGTGATCTTGATTTCTCTTCAGATCCTTGGTTTGATATCTCTGAAAGTGCTAAAGACTTGGTTAAGAAAATGCTTGTTAGAGATCCTAGAAAACGGATAACAACACATGAAGTTCTTCGTCACCCTTGGATTCAGGTTGATGGAGTTGCTCCAGACAAGCCTCTTGATTCTGCAGTTTTGAGTCGCCTGAAGCAGTTTTCTGTAACAAACAAACTAAAAAAAATGGCTCTTAGAGTTATTGCAGAGAATCTCTCTGAAGAAGAAATCTATGAATTGAAAGTAATGTTTAAGATGATAGACACGGACAACAGTGGTCAAATTACTTTAGAAAAACTCAAGGCTGGATTGAAAATGCTTGGTGCAAATCTCAGTGAACCAGAAATTTTGGATCTAATGCAAGCTGCAGATGTTGATAACAGTGGCACAATTGACTATGGAGAATTCATAGCTGCAACATTGCATTTAAACAAAGTTGACAGAGAAGATCATTTAGTTGCAGCTTTTTCATTTTTTGATAGAAGTGGAAGTGGCTACATCACTCAAGATGAGCTTCAAGAAGCTTGCGAAGAATTTGGCATTGAGAATGTCTGCTTGGAGGAAATGATCCAAGAAGCTGATCGGAATAATGATGGCCGAATAGACTACAACGAATTCGTGGCTATGATGCAGAGAGGCAATGCAGATTTAAGTAAAAACGGTTTAAAGGGTGGCACTGATTTTAGTATTGGGTTTAGGGAGGTACTATCAGTGTGTTGA 1773 0.3993 MMGNNCVGSKTSNDALFPYVLPGSFWWLHQTSVTEISDAPSLVTKIQDTNFLENVQENPPQVVKINHEEMKLKPTVPKHDKETNMPSEEQTRHMQKMPHKVKRLPIGLQAESILKRKNGNFKEYYNLGQELGKGQYGTTFLCTEKATGKNYACKSIPKVKLVMDDDVEDVRREIEIMHHLKGCPNVISIKGAYEDGVAVYVVMELCEGGELFDRIVEKGHYTERKAAKLARTIVSVIEGCHSLGVMHRDLKPENFLFVDGNEESTLKAIDFGLSVFFKPGEVFKDVVGSPYYIAPEVLRRHYGPEADVWSAGVIIYILLCGTPPFWGESEQEIFEEVLHGDLDFSSDPWFDISESAKDLVKKMLVRDPRKRITTHEVLRHPWIQVDGVAPDKPLDSAVLSRLKQFSVTNKLKKMALRVIAENLSEEEIYELKVMFKMIDTDNSGQITLEKLKAGLKMLGANLSEPEILDLMQAADVDNSGTIDYGEFIAATLHLNKVDREDHLVAAFSFFDRSGSGYITQDELQEACEEFGIENVCLEEMIQEADRNNDGRIDYNEFVAMMQRGNADLSKNGLKGGTDFSIGFREVLSVC 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01876 590 Pfam Protein kinase domain 125 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01876 590 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 48 569 - -
Gma03g01876 590 CDD EFh 430 490 IPR002048 GO:0005509
Gma03g01876 590 SUPERFAMILY EF-hand 412 563 IPR011992 -
Gma03g01876 590 ProSiteProfiles Protein kinase domain profile. 125 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01876 590 SMART serkin_6 125 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01876 590 PANTHER SERINE/THREONINE-PROTEIN KINASE 48 569 - -
Gma03g01876 590 MobiDBLite consensus disorder prediction 77 99 - -
Gma03g01876 590 SUPERFAMILY Protein kinase-like (PK-like) 123 384 IPR011009 -
Gma03g01876 590 Gene3D Phosphorylase Kinase; domain 1 107 201 - -
Gma03g01876 590 Gene3D - 395 566 - -
Gma03g01876 590 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Gma03g01876 590 MobiDBLite consensus disorder prediction 77 95 - -
Gma03g01876 590 ProSitePatterns EF-hand calcium-binding domain. 475 487 IPR018247 -
Gma03g01876 590 SMART efh_1 536 564 IPR002048 GO:0005509
Gma03g01876 590 SMART efh_1 466 494 IPR002048 GO:0005509
Gma03g01876 590 SMART efh_1 430 458 IPR002048 GO:0005509
Gma03g01876 590 SMART efh_1 502 530 IPR002048 GO:0005509
Gma03g01876 590 ProSitePatterns EF-hand calcium-binding domain. 545 557 IPR018247 -
Gma03g01876 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Gma03g01876 590 Gene3D Transferase(Phosphotransferase) domain 1 202 394 - -
Gma03g01876 590 ProSiteProfiles EF-hand calcium-binding domain profile. 537 567 IPR002048 GO:0005509
Gma03g01876 590 ProSiteProfiles EF-hand calcium-binding domain profile. 462 497 IPR002048 GO:0005509
Gma03g01876 590 ProSiteProfiles EF-hand calcium-binding domain profile. 498 533 IPR002048 GO:0005509
Gma03g01876 590 CDD STKc_CAMK 125 382 - -
Gma03g01876 590 ProSiteProfiles EF-hand calcium-binding domain profile. 426 461 IPR002048 GO:0005509
Gma03g01876 590 Pfam EF-hand domain pair 429 491 IPR002048 GO:0005509
Gma03g01876 590 Pfam EF-hand domain pair 503 562 IPR002048 GO:0005509
Gma03g01876 590 ProSitePatterns EF-hand calcium-binding domain. 511 523 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01876 Gma-Chr3 44731110 44735560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01876 53 565 EF-hand Containing Proteins AT3G10660 70.307 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma03g01876 Pkinase 4.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01876 K13412 - gmx:100814475 1190.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01876 03 44731110 44735560 Gma10g01173 10 33505660 33512842 PCT
Gma03g01876 03 44731110 44735560 Gma20g00702 20 26932720 26940405 PCT
Gma10g00783 10 10574318 10578846 Gma03g01876 03 44731110 44735560 PCT
Gma02g01820 02 42178956 42183830 Gma03g01876 03 44731110 44735560 PCT