Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01853 ATGGCCGATAAGCACGGAAGAAGCTGCTGTTGCTGCCTCTTTGGAATCTTGTGGAAGATTCTGGTTGCACTCATCGTCCTCGTTGGCCTCGTATTCCTCATATTCTGGCTGGTGGTTCAACCCCGCTCCTTCAAGTTCCAGGTCACGGAAGCGGACCTAACCCAATTTGATTACTACACCAACAATCACACTCTCCACTACAACATGGTGCTCAACTTCACTGCACGCAACCCCAACAAGAAGCTCAGCATATACTACGACAAAGTTGAGGCATTAGCATTCTACGAGGATGCCAGGTTCGCCAATTACGATGTCATAACTCACATGAACTCCTTCCGCCAGTACAAGAAGAGCACCAGCCCCATGAGCGCCGTTTTCTCGGGGAAGAAGGTGTTGATGCTCAACAGCGAACAAGTCTCTAAGTTGAACCAAGACAAGAGTGATGGGGTTTATGACATCTACGTGAAGCTCAACTTCAGGATTCGGTTCAGGCTCGGGGACTCCATATCCGGTAACTTGAAGCCCAAGGTCAAATGTCACCTCAAGGTTCCCTTCAGTAAAAGTGGCACCTTTACTCTCTTTGAGACCACCAAATGTTCTGTCCATTTCTAG 612 0.4853 MADKHGRSCCCCLFGILWKILVALIVLVGLVFLIFWLVVQPRSFKFQVTEADLTQFDYYTNNHTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDARFANYDVITHMNSFRQYKKSTSPMSAVFSGKKVLMLNSEQVSKLNQDKSDGVYDIYVKLNFRIRFRLGDSISGNLKPKVKCHLKVPFSKSGTFTLFETTKCSVHF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01853 203 PANTHER OS05G0367900 PROTEIN 4 201 IPR044839 GO:0098542
Gma03g01853 203 Pfam Late embryogenesis abundant protein 73 178 IPR004864 -
Gma03g01853 203 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 4 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01853 Gma-Chr3 44483248 44484210 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01853 38 186 SNARE and Associated Proteins AT1G32270 34.228 3.81e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01853 - - gmx:547482 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01853 03 44483248 44484210 Gma03g01853 03 44483248 44484210 ECH
Gma19g01890 19 48090394 48093597 Gma03g01853 03 44483248 44484210 GST
Gma03g01853 03 44483248 44484210 Gma10g00737 10 9287246 9287929 PCT
Gma10g00737 10 9287246 9287929 Gma03g01853 03 44483248 44484210 PCT