Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01852 ATGGCCGATAAGCAACCCCACTTGAACGGCGCTTATTACGGTCCCGCCATTCCTCCGGCGGAGCAACCACGCTACCGCCCTCACAGTCACCGCGGAAGAAGCTGCTGTTGCTGCCTCTTCGGAATCTTGTGGAAGATTCTGGTTGCACTCATTGTCCTCGTTGGCCTCGCGGTCCTCATCTTCTGGCTGGTGGTTCAACCCCGTTCCTTCAAGTTCCACGTCACGGAAGCCGACCTAACACAATTTGATTACTATACCAACAACAACACCCTTCACTACAACATGGTCCTCAACTTCACTGCACGCAACCCCAACAAGAAGCTCAACATATACTACGACAAAGTTGAGGCATTAGCATTCTACGAGGATGTCAGGTTCGCAAGTTACGATGTCATAACACACATGAACTCCTTCCGCCAGTACAAGAAGAGCTCCAGCCCCATGAGCGCCGTTTTCACAGGGCAACAATTGCTGATGCTGAACAATGATCAAGTCTCAGAGTTCAACCAAGACAGGAATACTGGTGTTTATGACATCTATGTGAAGCTCTACTTCAGGATGAGGTTCAGGCTCGGGGACTTTATATCCAATGACTACAAGCCCAAGGTCAAATGTCACCTCAAGACCTCTGTATTCTTTCTACACGGCCCAACTCTTAACCGCTTGAATAACCCTCGCAGGACAATTCAATTAAGGCGTGCCAATTTTTGTTCTGGTAAGAAAAAAGTCACCTTGAACTTGAAATCAAATGAATTACAAGAACACCAACTAGGCCTCTGGAGCTTGTGTCGGGTCAGGCTTAATTCTGCCCTGACCATTGTTTCATATCAATTTGGTGTTCCCCGCCTTGCTGCTATTGTTGTGGGATTGAACCTTGAGGTGACATTTGACCTTGGGCTTCAAGTGACGGGATATGGAGTCCCCGAGCCTGAACCGAATCCTGAAGTTGAGCTTCACATAGATGTCATAAACCCCATCACTCTTGTCTTGGTTCAACTTAGAGGCTTGTTCATTGTTGAGCATCAACAATTTCTGTCCCGAGAAAACGGCGCTCATGGGGCTGGTGATCTTCTTGTACTGGCGGAAGGAGTTCATGTCGGCTTCCGTGACGTGGAACTTGAAGGAACGGGGTTGAACCACCAGCCAGAATATGAGGATTGCGAGGCCAACGGGGACGATGAGTGCAACGAGAATCTTCCACAAGATTCCGAAGAGGCAGCAGCAGCAGCTTGTTCCATGGTCTTGCTTATGAGCCATGCTTGCAGACGAGTGATGAACAGGAGATAA 1287 0.4872 MADKQPHLNGAYYGPAIPPAEQPRYRPHSHRGRSCCCCLFGILWKILVALIVLVGLAVLIFWLVVQPRSFKFHVTEADLTQFDYYTNNNTLHYNMVLNFTARNPNKKLNIYYDKVEALAFYEDVRFASYDVITHMNSFRQYKKSSSPMSAVFTGQQLLMLNNDQVSEFNQDRNTGVYDIYVKLYFRMRFRLGDFISNDYKPKVKCHLKTSVFFLHGPTLNRLNNPRRTIQLRRANFCSGKKKVTLNLKSNELQEHQLGLWSLCRVRLNSALTIVSYQFGVPRLAAIVVGLNLEVTFDLGLQVTGYGVPEPEPNPEVELHIDVINPITLVLVQLRGLFIVEHQQFLSRENGAHGAGDLLVLAEGVHVGFRDVELEGTGLNHQPEYEDCEANGDDECNENLPQDSEEAAAAACSMVLLMSHACRRVMNRR 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01852 428 Pfam Late embryogenesis abundant protein 99 205 IPR004864 -
Gma03g01852 428 PANTHER OS05G0367900 PROTEIN 22 208 IPR044839 GO:0098542
Gma03g01852 428 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 22 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01852 Gma-Chr3 44478076 44481107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01852 64 208 SNARE and Associated Proteins AT1G32270 35.862 8.31e-21 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01852 - - gmx:100795302 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01889 19 48088886 48089646 Gma03g01852 03 44478076 44481107 GST
Gma03g01852 03 44478076 44481107 Gma10g00736 10 9259961 9260943 PCT
Gma10g00736 10 9259961 9260943 Gma03g01852 03 44478076 44481107 PCT