Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01851 ATGGCCGATAAGCAGCCACACTTGAACGGTACCTATTACGGTCCCGCCATTCCCCCGGCGGAACAACCACGCAATCGCCATCACCACGGAAGAAGCTGCTGTTGCTGCCTCTTTGGAATCTTGTGGAAGATTCTGGTTGCACTCATCGTCCTCGTTGGCCTCGTATTCCTCATATTCTGGCTGGTGGTTCAACCCCGCTCCTTCAAGTTCCAGGTCACGGAAGCGGACCTAACCCAATTTGATTACTACACCAACAATCTCACTCTCCACTACAACATGGTGCTCAACTTCACTGCACGCAACCCCAACAAGAAGCTCAGCATATACTACGACAAAGTTGAGGCATTAGCATTCTACGAGGATGCCAGGTTCGCCAATTACGATGTCATAACTCACATGAACTCCTTCCGCCAGTACAAGAAGAGCACCAGCCCCATGAGCGCCGTTTTCTCGGGGAAGAAGGTGTTGATGCTCAACAGCGAACAAGTCTCTAAGTTGAACCAAGACAAGAGTGATGGGGTTTATGACATCTACGTGAAGCTCAACTTCAGGATTCGGTTCAGGCTCGGGGACTCCATATCCGGTAACTTGAAGCCCAAGGTCAAATGTCACCTCAAGGTTCCCTTCAGTAAAAGTGGCACCTTTACTCTCTTTGAGACCACCAAATGTTCTGTCCATTTCTAA 684 0.4956 MADKQPHLNGTYYGPAIPPAEQPRNRHHHGRSCCCCLFGILWKILVALIVLVGLVFLIFWLVVQPRSFKFQVTEADLTQFDYYTNNLTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDARFANYDVITHMNSFRQYKKSTSPMSAVFSGKKVLMLNSEQVSKLNQDKSDGVYDIYVKLNFRIRFRLGDSISGNLKPKVKCHLKVPFSKSGTFTLFETTKCSVHF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01851 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 18 225 - -
Gma03g01851 227 Pfam Late embryogenesis abundant protein 97 202 IPR004864 -
Gma03g01851 227 PANTHER OS05G0367900 PROTEIN 18 225 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01851 Gma-Chr3 44475044 44475955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01851 62 210 SNARE and Associated Proteins AT1G32270 34.228 8.49e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01851 - - gmx:100794249 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01888 19 48085968 48086801 Gma03g01851 03 44475044 44475955 GST
Gma03g01851 03 44475044 44475955 Gma10g00732 10 9128563 9129381 PCT
Gma03g01851 03 44475044 44475955 Gma02g01873 02 43424950 43426011 PCT
Gma10g00732 10 9128563 9129381 Gma03g01851 03 44475044 44475955 PCT
Gma02g01873 02 43424950 43426011 Gma03g01851 03 44475044 44475955 PCT