Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01850 ATGGCAGATTATAAGCAACACCACGGAAGAAGCTGCGGCTGCTGCTGCCTCTTTGGAATCTTGTGGAAGATTGTGGTTGCACTCATTGTCCTCGTTGGTCTTGTATTCCTCATATTTTGGCTGGTTGTTCAACCCCGCTACTTCAAGTTCCACGTCACGGAAGCGGACCTAACTCAATTTGAGTACTATCCAAACAACAACACCCTTCACTACAACATGGTCCTCAATTTCACTGCACGCAACCCCAACAAGAAGCTCAGCATATACTACGACAAAGTTGAGGCATTAGCATTCTACGAGGATGCCAGGTTCGCCAATTACGATGTCATAACTCACATGAACTCCTTCCGCCAGTACAAGAAGAGCACCAGTCCCATGAGCGCCGTTTTCTCGGGGCAGAAGGTGTTGATGCTCAACAACGAACAAGTCTCTCAGTTCAACCAAGACAAGAGTGTTGGAGCTTATGATATCTATGTGAAGCTCAACTTCAGGATTCGGTTCAGGCTCGGGGACTCGATTTCCCGTCACTTGAAGCCCAAGGTCAAATGTGATCTCAAGGTTCCCTTGAACAAAAGTGGCACCTTTACTCTGTTTCAGACCACCAAGTGCCATGTCAATGTCTAG 624 0.4728 MADYKQHHGRSCGCCCLFGILWKIVVALIVLVGLVFLIFWLVVQPRYFKFHVTEADLTQFEYYPNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDARFANYDVITHMNSFRQYKKSTSPMSAVFSGQKVLMLNNEQVSQFNQDKSVGAYDIYVKLNFRIRFRLGDSISRHLKPKVKCDLKVPLNKSGTFTLFQTTKCHVNV 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01850 207 Pfam Late embryogenesis abundant protein 77 183 IPR004864 -
Gma03g01850 207 PANTHER OS05G0367900 PROTEIN 6 205 IPR044839 GO:0098542
Gma03g01850 207 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01850 Gma-Chr3 44471004 44472109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01850 42 189 SNARE and Associated Proteins AT1G32270 33.784 3.42e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01850 - - gmx:100806990 413.305