Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01838 ATGTCTGGCTCCCGAAAGAAGCTTCTTCTGAACACCGTGTCCGTGAAACTAGGCTGCGGCACCTGCAGAAGACCAAGCCTGCGTCGCATATTCCACCCAAAGCCAAAACCAAAGAATCTTAACAACAACACCAATTACCGAAAGCACAAACATTCTTCTTCTTCTTCTGCTTCTTCTTCCTTTTTTGCAAGCCAATGGGGGGGTGACAGCACCAGCGCCACCCCCACCAACACCAACACCACATTCTCACCCTACGTTGATTCCTCACACTTTTCTGACTCAGATTCCTACGTGAAGGCTGTGGGGGGTTTAGGCAGAGCTGGGAAAGAAGGTGTGGCTGTGGAGAAAGACTCTGATGACCCTTATCTTGATTTCAGACATTCCATGCTTCAAATGATATTGGAGAACGAGATATACTCCAAGCAGGATCTCAGAGAGCTTCTGAACTGCTTTCTTCAGCTGAATTCACCGCATCATCATGGTGTTATAGTCAGAGCTTTCACTGAGATCTGGAACGGTGTTTTCTCTGTGAGGTCCAGTTCTCACATCCACCTTAAGCCACGTGAGTTCTAA 573 0.4764 MSGSRKKLLLNTVSVKLGCGTCRRPSLRRIFHPKPKPKNLNNNTNYRKHKHSSSSSASSSFFASQWGGDSTSATPTNTNTTFSPYVDSSHFSDSDSYVKAVGGLGRAGKEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKQDLRELLNCFLQLNSPHHHGVIVRAFTEIWNGVFSVRSSSHIHLKPREF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01838 190 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 179 IPR038933 GO:0045892
Gma03g01838 190 PANTHER TRANSCRIPTION REPRESSOR OFP6 1 179 - -
Gma03g01838 190 MobiDBLite consensus disorder prediction 37 57 - -
Gma03g01838 190 Pfam Transcriptional repressor, ovate 118 174 IPR006458 -
Gma03g01838 190 MobiDBLite consensus disorder prediction 28 57 - -
Gma03g01838 190 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 112 172 IPR006458 -
Gma03g01838 190 ProSiteProfiles OVATE domain profile. 114 173 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01838 Gma-Chr3 44406175 44406851 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma03g01838 Ovate 3.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01838 - - gmx:100804319 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01838 03 44406175 44406851 Gma03g01838 03 44406175 44406851 ECH