Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01824 ATGTCTCAGACCAAGAAATTGACGCCGAATCTGGATCAGCAGAGCACGAAGGTGCTGAATCTCACCGTGCTCCAGCGAATCGATCCGTACATCGACGAGATTCTCTTCACTGCCGCGCATGTCTCCTTCTACGACTTCAACATCGAAAGCAACCAGTGGAGTCGCAAGGATGTTGAAGGATCTCTCTTCGTTGTCAAGAGGAATTCACAACCACGGTTTCAGTTTATCGTAATGAATCGCCGGAATACAGATAATCTAGTTGAGAATCTATTGGATTTTGAGTATGAACTTAAAAAGCCGTACCTGTTATATCGAAATGCAGCTCAAGAAGTTAACGGTATATGGTTTTACAATCCAGATGAATGTGAAGAAGTTGCAAATCTCTTTAACAGGATACTTAATGCGTACCCAAAGACACCTCCAACTACAATACCGCCTGTTAACATAAGTGAGTCTGAGGAACTTCAGCCAGTGTCAATTATACCGGAAAGCCCTCTAGAGTCATCTTCAGTTGCTGCTTCTGCAATTGATGCTGTTGAAGATCCTGCATTTACAAACTTCTTCAGTACATTGAAGGTTACTGGAAATTATGCTTCCAATATGGAAAATTTTAGACAGCATTCTGCAACTGTCACTTCTGCTCCTGGTGGTTTGTTATCTACTGCACCTACTGTGCAAATACCATCTGCCTCTCATTCAACTTCATCGATATCAGGCTTCCCCCTTGACTCTCTTGAAACAGCCAAGAGTGGCAATCAAGTCATTAATCTTGTTAAGCCTTCTACTTTTTTTGCATCAACGTCTTCATCTTCACTGTTAGTTCCACCTATTTATTCATCTGTGCCGCCTAGTGCAGTTGTTCATCATTCCCTGAATGTGCCACGCCAATACGGCACTCCAGTACTTCAACCCTTCCCTCCCCCTAATCCTCCTCTTTCTCTTACCCCTATTTCAAGCTCCACTCCAAATAGACCTGTAATCAGCAGGGATAATGTCCGTGATGCACTTTTATCATTGGTTCAGGAGGATCATTTCATTGACATGATGTTCCAGGCATTACTGAAGGTAGAGCTAGGCTATGGCAGAAAAGCCCACTTATGGTTTGGGCTTTGGGTGTACATTGAGCCGGTTTACTCTATGAATGAATATGGCGATGCAATACACACGCTCACTTGTTTTCCTTCGTCTCTGCAATTGAATTCCATGGCGGCCGTAAGAAAAATAATTGAGGTCAATAGAAATAAAATCTTGTCGCCATCTCTTCTCTCTTTTCGCCGGGGAATTGCTTACAAGCTTTTTGTTGGAGGATTGTCCTTCTACACCACAGAGAATGCATTATCAGAGGCATTCTCCAATTACGGGCAAGTTATTGAAGCCAAAATTGTAACAGATAGGGTGTCAGACAGATCTAAGGGATTTGGGTTTGTCACCTTTGCTTCTCAAGACGAGGCTGAGAATGCCATAGAAGATATGAAAGGAAAGACATTAAATGGACGTGTTATCTTTGTTGATTATGCAAAGCCCAATATCAACACTCGTGGTGAAATTCCAATTGCCAGAGGACCTCCTGAGCCAACATCAACACCAGATACTTGA 1596 0.4279 MSQTKKLTPNLDQQSTKVLNLTVLQRIDPYIDEILFTAAHVSFYDFNIESNQWSRKDVEGSLFVVKRNSQPRFQFIVMNRRNTDNLVENLLDFEYELKKPYLLYRNAAQEVNGIWFYNPDECEEVANLFNRILNAYPKTPPTTIPPVNISESEELQPVSIIPESPLESSSVAASAIDAVEDPAFTNFFSTLKVTGNYASNMENFRQHSATVTSAPGGLLSTAPTVQIPSASHSTSSISGFPLDSLETAKSGNQVINLVKPSTFFASTSSSSLLVPPIYSSVPPSAVVHHSLNVPRQYGTPVLQPFPPPNPPLSLTPISSSTPNRPVISRDNVRDALLSLVQEDHFIDMMFQALLKVELGYGRKAHLWFGLWVYIEPVYSMNEYGDAIHTLTCFPSSLQLNSMAAVRKIIEVNRNKILSPSLLSFRRGIAYKLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAENAIEDMKGKTLNGRVIFVDYAKPNINTRGEIPIARGPPEPTSTPDT 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01824 531 Pfam Dcp1-like decapping family 17 130 IPR010334 GO:0000290|GO:0008047|GO:0043085
Gma03g01824 531 CDD EVH1-like_Dcp1 19 133 - -
Gma03g01824 531 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 430 508 IPR000504 GO:0003723
Gma03g01824 531 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 1 356 IPR010334 GO:0000290|GO:0008047|GO:0043085
Gma03g01824 531 SUPERFAMILY PH domain-like 19 138 - -
Gma03g01824 531 SMART rrm1_1 431 504 IPR000504 GO:0003723
Gma03g01824 531 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 432 501 IPR000504 GO:0003723
Gma03g01824 531 PANTHER DECAPPING ENZYME 1A, PUTATIVE-RELATED 1 356 - -
Gma03g01824 531 Gene3D - 7 135 IPR011993 -
Gma03g01824 531 Gene3D - 426 523 IPR012677 -
Gma03g01824 531 SUPERFAMILY RNA-binding domain, RBD 430 519 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01824 Gma-Chr3 44259993 44266599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01824 432 516 Eukaryotic Initiation Factors Gene Family AT2G23350 31.765 6.40e-07 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01824 03 44259993 44266599 Gma03g01824 03 44259993 44266599 ECH