Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01818 ATGGGAAATATGCCACCAGGTTATCGCTTCTACCCCACAGAAGAGGAGCTGATTTTGTTCTATCTTCACAATAAGCTTGAAGGAGAAAGGGAAGACATGAATCGAGTTATTCCAGTCGTTGATATATACGACTACAACCCATCTCAACTCCCACAAATTTCAGGAGAGGCAAGTATGGGAGACACGGAGCAATGGTTCTTTTTCATTCCGAGGCAAGAGAGTGAAGCCAGAGGAGGAAGACCAAAGCGTCTCACAACTACAGGGTACTGGAAGGCCACAGGGTCTCCTAATCATGTTTATTCTTCGGATAATCACATCATCGGAATTAAAAGGACTATGGTTTTCTATAGTGGAAGAGCTCCAAACGGAACCAAAACCGATTGGAAGATGAATGAGTACAGTGCCATCAAAGGTGAACCATCATCCTCTATTTCCAATAAGGCTGTTCCCACGTTAAGGAAGGAATTCAGTTTATGCCGAGTGTACAAAAAATCAAAGTGTTTGAGGGCATTTGATAGACGACCACCTCCAAGGAGGGACGTAGTTAGCTATTCCGGTGCTCAAAATGTAGAAGAGCAACAAAAGGGTTCAACATTATATGATTATCATCATAAAATAATGGTGAAGAGAAGTACAACGTGTTCACCAGAGACTTCTACTTCCTCCGGAGACCATGACCAGCCCCCTCTTCACGGTGAGGAAACTACTCAAATGGATGTTGACCCTTTTTTGGATTGGGAGAAAGTGGATTTTTTCTTGGGATCAGAACCATGA 774 0.4315 MGNMPPGYRFYPTEEELILFYLHNKLEGEREDMNRVIPVVDIYDYNPSQLPQISGEASMGDTEQWFFFIPRQESEARGGRPKRLTTTGYWKATGSPNHVYSSDNHIIGIKRTMVFYSGRAPNGTKTDWKMNEYSAIKGEPSSSISNKAVPTLRKEFSLCRVYKKSKCLRAFDRRPPPRRDVVSYSGAQNVEEQQKGSTLYDYHHKIMVKRSTTCSPETSTSSGDHDQPPLHGEETTQMDVDPFLDWEKVDFFLGSEP 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01818 257 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 249 - -
Gma03g01818 257 MobiDBLite consensus disorder prediction 211 226 - -
Gma03g01818 257 MobiDBLite consensus disorder prediction 211 239 - -
Gma03g01818 257 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Gma03g01818 257 Gene3D NAC domain 13 168 IPR036093 GO:0003677|GO:0006355
Gma03g01818 257 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 249 - -
Gma03g01818 257 SUPERFAMILY NAC domain 3 164 IPR036093 GO:0003677|GO:0006355
Gma03g01818 257 ProSiteProfiles NAC domain profile. 4 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01818 Gma-Chr3 44209210 44211421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01818 7 251 NAC Transcription Factor Family AT5G22380 47.390 1.47e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma03g01818 NAM 3.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01818 - - gmx:100800056 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01818 03 44209210 44211421 Gma03g01818 03 44209210 44211421 ECH
Gma19g01860 19 47801920 47803966 Gma03g01818 03 44209210 44211421 GST