Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01784 ATGGCCGAAGAACACCGATGCCAAGCTCCCGAAGGTCACAGACTCTGCTCCAACAACTGCGGCTTCTTCGGTAGCCCCGCCACAATGAATCTCTGTTCCAAATGCTACAGAGACATCCGTTTGAAGGAAGAAGAACAAGCCAAAACTAAATCCACAATCGAAACCGCTCTTTCTGGATCTTCCTCCGCCACCGTCGCCGTTGCCTCCGCCGTGGATTCTCTTCCGGCGCCGGTTGAATCCCTCCCTCAACCGTCGGTGGTGAGTTCGCCAGATGTGGCCGCACCGGTTCAGGCGAACCGGTGCGGCGCGTGTAGGAAGCGCGTGGGATTGACTGGGTTTAAGTGCAGGTGCGGAACCACGTTTTGTGGGACTCACCGGTACCCCGAGAAACACGCGTGTGGCTTCGATTTCAAGGCGGTGGGGAGAGAGGAGATAGCACGGGCGAATCCCGTGATCAAAGGCGAGAAGCTACGGAGGATTTAA 483 0.5694 MAEEHRCQAPEGHRLCSNNCGFFGSPATMNLCSKCYRDIRLKEEEQAKTKSTIETALSGSSSATVAVASAVDSLPAPVESLPQPSVVSSPDVAAPVQANRCGACRKRVGLTGFKCRCGTTFCGTHRYPEKHACGFDFKAVGREEIARANPVIKGEKLRRI 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01784 160 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Gma03g01784 160 Gene3D - 77 156 IPR035896 -
Gma03g01784 160 SUPERFAMILY AN1-like Zinc finger 93 155 IPR035896 -
Gma03g01784 160 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 57 - -
Gma03g01784 160 ProSiteProfiles Zinc finger AN1-type profile. 95 141 IPR000058 GO:0008270
Gma03g01784 160 SMART AN1_Zf_4 101 138 IPR000058 GO:0008270
Gma03g01784 160 Pfam AN1-like Zinc finger 101 137 IPR000058 GO:0008270
Gma03g01784 160 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 160 - -
Gma03g01784 160 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 160 - -
Gma03g01784 160 Gene3D - 1 63 - -
Gma03g01784 160 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Gma03g01784 160 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01784 Gma-Chr3 43960084 43962295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01784 1 160 C2H2 Transcription Factor Family AT3G52800 53.529 5.10e-52 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01784 - - gmx:100527251 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01784 03 43960084 43962295 Gma03g01784 03 43960084 43962295 ECH
Gma19g01827 19 47553561 47555383 Gma03g01784 03 43960084 43962295 GST
Gma03g01784 03 43960084 43962295 Gma10g00651 10 7228373 7236578 PCT