Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01777 ATGGATGCGGAATCGGAGAAGCGCTCTGCTTCCACCATCTCTTTTTCTTCTTCATCTTCTAACTCGTCTTCCTCCTGCCACCGTTTGGATCGGCTCGTCGACGCCGAGGAGATTCAAGCGGCGGAGACTCTCGCGCAGTTGGCAATGCGCGACTCTCATTCCGCCGATAAATGGTGCACCAAACAGGACACAACCCGAGTCACTCGCGAGTCACCGACTCTTCTTCATTCGGATCTCTCACTTGGGCCTGGGGGCCAAGCTATTGCAGGTCAGTATCCAGATGAAAAGATATCCACTACAACTGTAGAAACAGAAATGTTTCAGCAGGATGACTGCTCGAGACACATGAAGGTGGAGCAGGATGCTGATGTATTACCTAACACAAGTTACTCCTTAGTTCGAAGCCGCAAGTCAAGGCGAAATTTAACTGAGGAAGAAAAAGAAGTAAGGAGGATACGTAGGATATTGGCAAATAGAGAGTCAGCTAGACAGACAATTCGCCGTAGGCAGGCTTTGTGTGAGGAGTTAACTAGAAAAGCTGCCTCTTTGGTGGTGGAGAATGAAAACCTAAAGAGGGAGAAGCAATTGGCTTTGAATGAGTATCAGTCTTTGGAGACTACAAATAAGCACTTGAAGGCACAGATAGCCAAGTCAATAAACACTGAAGTGGAGAAAACTCCTGTTGAGCCTGGGTCATCTGTGGCTGAGGTAACACCTTTGTCTGGTAACGGTCCATGGTTCCTTTATAACCATTTTCCAGTTCCACAGATATTTTGGCCTTCCATCCTTCAGTTTTCTAATCCGGTTCATTTACAAAATACATCATTGAATTCCTTCTCCATTCCACCTAATGCCTATGTTCCTTGTTCTTCCGAATCTGAATCACGTCACAAGCAAAATAACCTTATAAATGATAATCGAACACAAAATCCATTTTACATGTTTCCATGTCCTTGGTTATTCCCTCTTCCACAGTTTGGAAATCAACAATCATCTCCTTCCAGTAGCCTGAAAGATGAACAAGATAATCTATCTCTAGGTAAACCATGTAGTTCTAGTTCATCTTTGAATACAATGGCAAATGTGGATTATCAAGCAGCGTTACCTATCAAACTTAAAACAGCAGCTTCTGGCTGGACAGAGGCCATATCTATTAATGGCCCTGGTTGGGCCACTCCAAGATCTTCTTTGGATGGAGCTTATATTGCAACTTCTTCACTGGAAAAGAAACAAGGACAGTGCATTTGCCAGGGGAGAAATCTAGTGGATGCAGTTGCTGCTGCAGAAGCAAGAAAGAGGAGAAAGGAACTAACAAAGCAGAAAAGCATCCATAACCGCCAGTCCCGGATGCACTGTTGA 1359 0.4452 MDAESEKRSASTISFSSSSSNSSSSCHRLDRLVDAEEIQAAETLAQLAMRDSHSADKWCTKQDTTRVTRESPTLLHSDLSLGPGGQAIAGQYPDEKISTTTVETEMFQQDDCSRHMKVEQDADVLPNTSYSLVRSRKSRRNLTEEEKEVRRIRRILANRESARQTIRRRQALCEELTRKAASLVVENENLKREKQLALNEYQSLETTNKHLKAQIAKSINTEVEKTPVEPGSSVAEVTPLSGNGPWFLYNHFPVPQIFWPSILQFSNPVHLQNTSLNSFSIPPNAYVPCSSESESRHKQNNLINDNRTQNPFYMFPCPWLFPLPQFGNQQSSPSSSLKDEQDNLSLGKPCSSSSSLNTMANVDYQAALPIKLKTAASGWTEAISINGPGWATPRSSLDGAYIATSSLEKKQGQCICQGRNLVDAVAAAEARKRRKELTKQKSIHNRQSRMHC 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01777 452 Coils Coil 427 447 - -
Gma03g01777 452 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 148 211 IPR004827 GO:0003700|GO:0006355
Gma03g01777 452 Coils Coil 159 214 - -
Gma03g01777 452 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 3 447 - -
Gma03g01777 452 MobiDBLite consensus disorder prediction 52 93 - -
Gma03g01777 452 SMART brlzneu 146 210 IPR004827 GO:0003700|GO:0006355
Gma03g01777 452 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Gma03g01777 452 PANTHER G-BOX-BINDING FACTOR 3-RELATED 3 447 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gma03g01777 452 MobiDBLite consensus disorder prediction 330 353 - -
Gma03g01777 452 MobiDBLite consensus disorder prediction 1 26 - -
Gma03g01777 452 CDD bZIP_plant_GBF1 151 202 IPR045314 GO:0003700|GO:0006355
Gma03g01777 452 SUPERFAMILY Leucine zipper domain 149 205 IPR046347 GO:0003700|GO:0006355
Gma03g01777 452 MobiDBLite consensus disorder prediction 8 26 - -
Gma03g01777 452 Pfam bZIP transcription factor 146 208 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01777 Gma-Chr3 43901435 43905943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01777 137 452 bZIP Transcription Factor Family AT1G19490 36.888 1.72e-51 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma03g01777 bZIP_1 1.7e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01777 - - gmx:778152 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01777 03 43901435 43905943 Gma03g01777 03 43901435 43905943 ECH
Gma19g01823 19 47521452 47526429 Gma03g01777 03 43901435 43905943 GST