Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01774 ATGGGTTCATTCTCTGGCACTTGTGAAATAGTTGAAGCAAGGGGGGAGCTAAATACAAGGAAAGCTCCTGGGGTTTATCAGTCCAGTTCTGAGTGTAGCACATCTGAGAAAAATCATAAACTTTCGGTGCTGAAATTGGGATACAAGGATGATCTAGACGATGATATCAACAAGCTTTTTGAATCGATTGCTCTTAAATCTTCATCAAGGGATTTGAGCCTTTTCCAAGATGGTACAAGTCCTAGGCTGAAAAGTGCATTAAAAAAGCCAATTACAACGGGTGTTCCTCGGTCCCCAAGAGTTGGGACTTCTGAGTCCGTTAATTTGAAGCAAGCATTAAGAGACCTTTGTATATCCAAGGCATCAGAAATGGCTGCTATGAAACGATTATCAAAGTCAACAACAGCTTCTCCTAGATTATCTGAAGTTGGGAAGATACAGACATTGTACAATTCAGTTGTAGCTGAAACCTGTCGATCTGGGTCTTCCTTTGTTGAGAGCAAGGGACATCAAATTGAAATATCTCTAGTGCCAGAAAAAGGCAAATCCCTTTCCTTGGAGAAAACCTCTCAATCTTATCAAACTTCCCAAATTGCATCGTCGAGCCGAAACATTCATTCTTCTTGGGAAATTGCTGTTGCAACTACTAAATATGATGCTGGGAGTTCATTGATACAAAGTGATTTGGCATGCTCATCAAGTAAAGTTGGGATTCAATCACAACGAGTGGTACCTGTTGAAACAGAAGAACAAGCATCTGCCTCTTCTCCCTCTCTTTATAATACATTTGGAAGCAAATCAGAGGTGCCCAAAAATGCTTCCTCCCCTAAAAAGTTGGGAAATAAAGCATATATGTCAAATACTGGGAAGAAAGGTAGGTTGCAAACAGTATCGTCATCTACTTCTGTAAATGACAACAGAGTTAACAAACCGCCATGCCATGCCCCTCGCACTGTTAAATCGGTCATCAAGAACAAGAATCTGAGTAAGAAGAAACAAAAGGAGGATTCAGGTTCTGCTTTGCATGGTCCTACACCCAATGAAGTCAATAAGCCAGTTCCTGGTACACCTCGGCTAATTTGTGAGAGATGTAGGTGTGCTTTGGAAAATACTTGCGAAGAAAAAAACCAAGATATTGTGGCATTGGACTCTATCAGTCCTGGAGATGGAGTAAACTTGAGTAATGTACACTCTGGTTCAAATAAACCTGGTTTGGTGTCAAGTAGTGTTAATAAAAGCAAAACAGGTGCAAAAGTGAAGAACACCAAGTTGAAAGAGCAAATTGATTTTTCACAAAGTTCAAAGAGTAGTCAAGGTGAGTACAGTAGTAGTACAAGTACCAGTGATGAGAGCAACGTAAGTGGTTCAAGTCGTAGCACTAGGCCTCACATGTCAAAGGATGTCAGGTGGGCAGCCATACGACATGCTCAAATGCAGCATGGAGTCTTGGGCTTGAGACACTTCAATCTTTTAAAGAAACTTGGTTGTGGAGACATTGGGACTGTATATCTTGCGGAACTAATTGGCACTAGCTGCCTGTTTGCTATTAAGGTCATGGACAATGAATTTTTGGAAAGAAGAGAGAAGATGCCTAGGGCTCAAACTGAGAGAGAAATATTAAGGATCCTGGATCACCCTTTTCTTCCCACAATGTATGCACAATTTACATCAGATAATCTATCGTGTCTGGTCATGGAGTATTGTCCAGGTGGAGATCTTCATGTTCTACGGCAGAAGCAGCTTGGTAGATATTTCTCGGAGCCAGCAGCAAGGTTTTATGTTGCTGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCCGAAAACATTCTTGTTCGGGAAGATGGCCACATTATGCTCACAGATTTTGATCTGTCCCTGAGGTGTGCTGTTAACCCAACGCTTCTGAAATCATCTTCTGATGTTGACCCTGCAAAAATTTCAGGTCTAAGTGCACAAGCAAGTTGCATTGAGCCATTTTGCATTGAACCATCTTGTCAAGTTCCATGCTTCAGCCCAAGATTGCTACCCGCTGCTGCAAAAGCAAGGAAACTAAAAGTTGATCTTGCAGCCCAGGTCAGATCATTGCCACAGCTTGTGGCTGAGCCCACTGATGCAAGATCAAACTCATTTGTTGGCACACATGAATACTTGGCTCCTGAGATCATCAAAGAAGAGGGACATGGAGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTCTATGAACTTTTGTACGGTAGAACACCCTTTAAAGGTTCAAACAATGAAGAAACATTGGCCAACGTAGTGTTGCAGGGTCTTCGATTCCCCAAGCACCCAAATGTTAGTTTCCAAGCAAAGGATCTGATTAGAGGGTTGTTGGTTAAAGAGCCCGAAAACCGTTTGGGTTCAGAGAAAGGAGCTGCTGAGATTAAACAGCACCCCTTCTTCGAGGGCCTTAACTGGGCCTTAATTCGTTGCGCTGTCCCTCCAGAACTTCCAGACTTTTATGATTTTGGAGTTTCAGACATGGTGAACCCACAGGGCAAGGGTGCTAAGTACTTGGAGTGTAAAGTAGGAGAGCATGTAGAATTCGAGTTGTTTTAA 2616 0.4239 MGSFSGTCEIVEARGELNTRKAPGVYQSSSECSTSEKNHKLSVLKLGYKDDLDDDINKLFESIALKSSSRDLSLFQDGTSPRLKSALKKPITTGVPRSPRVGTSESVNLKQALRDLCISKASEMAAMKRLSKSTTASPRLSEVGKIQTLYNSVVAETCRSGSSFVESKGHQIEISLVPEKGKSLSLEKTSQSYQTSQIASSSRNIHSSWEIAVATTKYDAGSSLIQSDLACSSSKVGIQSQRVVPVETEEQASASSPSLYNTFGSKSEVPKNASSPKKLGNKAYMSNTGKKGRLQTVSSSTSVNDNRVNKPPCHAPRTVKSVIKNKNLSKKKQKEDSGSALHGPTPNEVNKPVPGTPRLICERCRCALENTCEEKNQDIVALDSISPGDGVNLSNVHSGSNKPGLVSSSVNKSKTGAKVKNTKLKEQIDFSQSSKSSQGEYSSSTSTSDESNVSGSSRSTRPHMSKDVRWAAIRHAQMQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDNEFLERREKMPRAQTEREILRILDHPFLPTMYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRYFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVNPTLLKSSSDVDPAKISGLSAQASCIEPFCIEPSCQVPCFSPRLLPAAAKARKLKVDLAAQVRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQGLRFPKHPNVSFQAKDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAVPPELPDFYDFGVSDMVNPQGKGAKYLECKVGEHVEFELF 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01774 871 MobiDBLite consensus disorder prediction 246 356 - -
Gma03g01774 871 ProSiteProfiles Protein kinase domain profile. 488 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01774 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Gma03g01774 871 MobiDBLite consensus disorder prediction 246 308 - -
Gma03g01774 871 PANTHER FLIPPASE KINASE 1-RELATED 1 871 - -
Gma03g01774 871 MobiDBLite consensus disorder prediction 392 465 - -
Gma03g01774 871 SUPERFAMILY Protein kinase-like (PK-like) 462 841 IPR011009 -
Gma03g01774 871 CDD STKc_phototropin_like 486 838 - -
Gma03g01774 871 SMART serkin_6 488 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01774 871 Pfam Protein kinase domain 489 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01774 871 Pfam Protein kinase domain 717 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01774 871 MobiDBLite consensus disorder prediction 426 461 - -
Gma03g01774 871 Gene3D Phosphorylase Kinase; domain 1 488 571 - -
Gma03g01774 871 Gene3D Transferase(Phosphotransferase) domain 1 572 829 - -
Gma03g01774 871 MobiDBLite consensus disorder prediction 392 417 - -
Gma03g01774 871 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01774 Gma-Chr3 43875555 43878955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01774 1 871 AGC Kinase Gene Family AT3G52890 52.401 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gma03g01774 Pkinase 3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01774 - K08286 gmx:100792120 1661.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01820 19 47494460 47497884 Gma03g01774 03 43875555 43878955 GST
Gma03g01774 03 43875555 43878955 Gma10g00622 10 6733738 6736891 PCT
Gma03g01774 03 43875555 43878955 Gma13g01313 13 27651101 27655586 PCT
Gma10g00622 10 6733738 6736891 Gma03g01774 03 43875555 43878955 PCT
Gma13g01313 13 27651101 27655586 Gma03g01774 03 43875555 43878955 PCT