Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01768 ATGGCTCAGAAGTACTTGCACGAGCTACTTGAGGAGGATCAAGAACCGTTCTTTCTAAACAAGTATATTTCCGATAGGCGAACCCAGATGAAGAGGCCTTCCCCGAAGACGAGTCTGCAAGTGAAGAAACGCAAATCAACCAATCCAAACACAAACTTCCCGAGAAATCTCTGCAAAAGCGCTTGTCTTTTCTCTCTCACAGACACCCCAGACCTCAGAAAATCACCACTCTTCGAATTCACTTCCCCAGTCAAAAGCCCTTGCAAATCACCAAACGCTATTTTTCTACACATCCCTTCTAGAACCGCTGCTCTGCTTCTAGAAGCCGCTCTCAGGATCCAGAAACACTCCTCACATGTTACTTCAAAGCCCAAAACAAAAGCCCATTCCTTCGGCCTCTTCGGGTCACTGTACAAGAGACTCACTCAACGGAACCAGAAAAAGCATGAGATAGAGAGTGGTGGAGGCGTTAAGATTTCCGTGAAGGATGTTTTGAAGTGGGATTCTTCTGTGGGGCGAAGAAAAGTTTCTAAAGCCAACGGGAAATGCAAGGAGCAAGAAGAAACAGTGAATGTGAATGTGAATGTGAATACGTGTTCTTACAATGGTAGTAGTGCTCTTTGGTCAGAGAGCAATGAAGATAACAAATCACTAGACATGGAAACCTCAAGTAGTGGCTACTACTCTGAAGAGATTCACTTCGTAACCAATCACAAACAGTACTCCACGTGCTTCTGCGAAAGCCCGTTCCGTTTTGTTCTCCAAACAAGTTCCCCTTCCTCCGGTCATCACACGCCGGAGCTTCCCTCGCCGAGTCGCCACCCAACTGAGGAGAAAGAAAGTAATGAAGGTGAGAGTGTGAAGAAATTCGAATCAGGGGAAGAGGAGGAGGAAGATAAGGAACAGTGCAGTCCAGTGAGTGTGTTAGACCCTCCATTCGAGGACGATGACGAAGGGCATGGAAACGGTGATGAAGAAGAAGAGGAGGAGGGTGGTTTTGATATGGAGTGCAGTTATGCGATTGTACAGAGAGCCAAGCAGCAGTTATTGTACAAACTTTGTAGATTTGAGAAACTGGCGGAGTTGGATCCAGTAGAACTTGAGAAAAGAATGCAGGACCAAGAAGAGGACGAGGATGAAACATTTATGGAAGAGGAACATGGTGATGATGAGAACAACCAAGCATCATACAAAGAAAATGACTTCATAGAACTAATTTTCCAAGCTCTGTGCCAATCAAGGGTCCATGACAGACAGCAAATCCCAGAGGACTTTAAGAAGCTGGTATCTGATCTCATTATGGAAGAAGAGAGAgcacttgattccttagaagatagggacatggtgataagaaggatatgcaagaggctggaattatggaaagaagtggagtctaacacaattgacatgatgatagaagatgacttctctagagaggatggtgtgtggaggaaaaatatagagcagataagaaatatggctggggagcttgagcttgctatctttggctttctggtagaggaattttcagaggaactagtatgttaa 1548 0.3857 MAQKYLHELLEEDQEPFFLNKYISDRRTQMKRPSPKTSLQVKKRKSTNPNTNFPRNLCKSACLFSLTDTPDLRKSPLFEFTSPVKSPCKSPNAIFLHIPSRTAALLLEAALRIQKHSSHVTSKPKTKAHSFGLFGSLYKRLTQRNQKKHEIESGGGVKISVKDVLKWDSSVGRRKVSKANGKCKEQEETVNVNVNVNTCSYNGSSALWSESNEDNKSLDMETSSSGYYSEEIHFVTNHKQYSTCFCESPFRFVLQTSSPSSGHHTPELPSPSRHPTEEKESNEGESVKKFESGEEEEEDKEQCSPVSVLDPPFEDDDEGHGNGDEEEEEEGGFDMECSYAIVQRAKQQLLYKLCRFEKLAELDPVELEKRMQDQEEDEDETFMEEEHGDDENNQASYKENDFIELIFQALCQSRVHDRQQIPEDFKKLVSDLIMEEERALDSLEDRDMVIRRICKRLELWKEVESNTIDMMIEDDFSREDGVWRKNIEQIRNMAGELELAIFGFLVEEFSEELVC 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01768 515 MobiDBLite consensus disorder prediction 372 387 - -
Gma03g01768 515 MobiDBLite consensus disorder prediction 33 51 - -
Gma03g01768 515 PANTHER OS04G0572500 PROTEIN 1 515 - -
Gma03g01768 515 MobiDBLite consensus disorder prediction 317 332 - -
Gma03g01768 515 MobiDBLite consensus disorder prediction 270 295 - -
Gma03g01768 515 MobiDBLite consensus disorder prediction 369 394 - -
Gma03g01768 515 MobiDBLite consensus disorder prediction 257 332 - -
Gma03g01768 515 Coils Coil 426 446 - -
Gma03g01768 515 MobiDBLite consensus disorder prediction 28 51 - -
Gma03g01768 515 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01768 Gma-Chr3 43757307 43760875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01768 2 314 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 42.814 9.78e-61 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01768 - - gmx:100790018 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01768 03 43757307 43760875 Gma03g01768 03 43757307 43760875 ECH
Gma19g01814 19 47395650 47403517 Gma03g01768 03 43757307 43760875 GST
Gma03g01768 03 43757307 43760875 Gma10g00619 10 6695305 6699499 PCT
Gma03g01768 03 43757307 43760875 Gma13g01308 13 27595335 27599736 PCT
Gma10g00619 10 6695305 6699499 Gma03g01768 03 43757307 43760875 PCT
Gma13g01308 13 27595335 27599736 Gma03g01768 03 43757307 43760875 PCT