Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01765 ATGCGTTCCAGCAACGGTGCATCAAGCAGCAGAGCCTCCAATGCTAACACTGGGCGCCACCCTGTGTACCGTGGAGTGAGGCGTAGGAGTAGTGGCAAATGGGTTTCTGAAATCCGTGAACCCAAAAAACCTAACAGGATTTGGTTAGGGACATTTGCCACCCCTGAAATGGCTGCTATTGCCTATGACGTGGCAGCGCTTGCTCTTAAGGGTAAGGATGCTGAACTCAACTTCCCTAACTCGGCTTCCTCCCTCCCCGTCCCCACATCATCTGCTGCTCGCGACATTCAGATGGCTGCGGCTAGCGCCGCAGCCGCTGTCGGAGCTGCGAATGATGCACTTGAAGGAAGCCGAGGAGGGAATGCTTCGGTTTCATTGACGGAAGAGTTTTCAGGGGGAAATTTGAACCACTTTGTGGATGAGGACTTGATCTTTGACATGCCGAATATTCTGGTCAATATGGCTGAAGGAATGCTACTGAGTCCTCCTCGTTTTGATAATTTTGCTGCTACCGACTATGAATACATGGATGAAGATCCTAACCTCTGGGGGTTCCCTAATTACTAG 567 0.5097 MRSSNGASSSRASNANTGRHPVYRGVRRRSSGKWVSEIREPKKPNRIWLGTFATPEMAAIAYDVAALALKGKDAELNFPNSASSLPVPTSSAARDIQMAAASAAAAVGAANDALEGSRGGNASVSLTEEFSGGNLNHFVDEDLIFDMPNILVNMAEGMLLSPPRFDNFAATDYEYMDEDPNLWGFPNY 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01765 188 Pfam AP2 domain 21 71 IPR001471 GO:0003700|GO:0006355
Gma03g01765 188 MobiDBLite consensus disorder prediction 1 31 - -
Gma03g01765 188 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 4 186 - -
Gma03g01765 188 SUPERFAMILY DNA-binding domain 22 81 IPR016177 GO:0003677
Gma03g01765 188 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 4 186 - -
Gma03g01765 188 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Gma03g01765 188 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Gma03g01765 188 PRINTS Ethylene responsive element binding protein signature 61 81 IPR001471 GO:0003700|GO:0006355
Gma03g01765 188 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Gma03g01765 188 MobiDBLite consensus disorder prediction 1 17 - -
Gma03g01765 188 CDD AP2 23 81 IPR001471 GO:0003700|GO:0006355
Gma03g01765 188 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01765 Gma-Chr3 43740703 43741376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01765 12 186 AP2-EREBP Transcription Factor Family AT2G36450 63.536 9.82e-60 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma03g01765 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01765 - - gmx:100799620 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01765 03 43740703 43741376 Gma03g01765 03 43740703 43741376 ECH
Gma19g01813 19 47384221 47384787 Gma03g01765 03 43740703 43741376 GST
Gma03g01765 03 43740703 43741376 Gma10g00617 10 6624547 6625417 PCT
Gma03g01765 03 43740703 43741376 Gma13g01306 13 27565401 27566334 PCT
Gma10g00618 10 6682494 6683549 Gma03g01765 03 43740703 43741376 PCT
Gma13g01307 13 27581580 27582333 Gma03g01765 03 43740703 43741376 PCT