Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01764 ATGGAAATGGAGGACCATCATCGTCACCATCATCAGTATGGCATCACTGATCTGAGGCAACTCGTTAACGGCCCTCGGCCGACTCATTTCCCCACCATGCCGCCACCGCCCAAGGCGGAGCTGTTCCCCGGCGACTCCAACCTGCAGGCTGCGACACAACAACACTACGAGATGATGATGTTTGGTCGTCAAGTAGCCGACATAATGCCTCCTCGTTGTCTTCATGACTTCGCCTCCACCGATTCCGCCACCAACATCGCCGTTGCCACTCCCACCACCACCCCTAGCGCCTCCACTCCTCCGCTTAGTTGCTTAGAGGCCGAGACCGCAGGATGCATCGGTGGAGACGCCTCCACTGGAAGATGGCCCAGACAAGAGACTCTCACTCTCCTTGAGATCAGATCTCGCCTCGACTCTAAATTCAAAGAGGCTAATCAAAAGGGTCCCTTATGGGATGAAGTTTCTAGGAACATGTCTGAAGAACATGGATATCAAAGGAGTGGGAAAAAGTGCAGGGAGAAGTTTGAGAACCTGTACAAATATTACAAGAAGACAAAGGAAGGAAAAGCTGGAAGACAAGATGGGAAGCATTACAGGTTCTTTCGTCAACTTGAAGCCTTATATGGTGAAAACAGTAACCAAGCCTCGGTGCCAGAAACCAATTTTGGCAGTGGTAGCCTTCGTTTCCACACAAGCAGCCACAATAATAACCCTTCTCAAACAAATCAAGAAATGTTTCAGTCTCAGAAGCATTGTGACAGCCTAAGCCTCACCAACTCCACTGATTTGGACACTTCATCATCGGATGACAATGATCAAAATAGCACTGGCAGGGAACTCAACAAGGACAATGACTCCATGGAGAAGAGGAGAAAGAGGGTGAGTGGAAGAAGCTGGAAGGTGAAGATAAAGGACTTCATTGACTCACAGATGAGGAAGCTGGTGGAGAAGCAAGAGGAGTGGTTGGATAAACTCACAAAGACACTGGAACAGAAGGAAAAAGAGAGAGTGTTAAGAGAAGAAGAGTGGAGGAGACAAGAATCTGTAAGGTTGGAGAGGGAACACAAATTTTGGGCTAAAGAGAGAGCATGGATTGAAGCAAGGGATGCTGCTTTAATGGAGGCTTTGCACAAATTAACACGAAATGAGATAATGAAGAGTACTCATTCTCACGAGGGTCTAATGGTAACTGGAATTCAAATCCACAGTGAAAACCAGAATGAAGATGGGAGTGAAATACTAAATAGCACTGCTGCCAGAGGTGCTGAAAGCTGGCCAGAATCTGAGATTGCAAGGCTTCAACAGTTGAGAGCTGAGATGGAGACAAGGTATATGCAAAGTGGGTTTTCAGAAGAGGTTATGTGGGAGGAAATAGCTACCAAAATGGCTTGTTTTGGTTACGAAAGGAGTGCTTTGGTATTCAAAGAGAAATGGGAAAGTATAAGCAGCAACTATGCAAGGAGTGCCAAGGATGGAAGCAAGAAGCGCAAGGAAGACTCAAGAAGTTGTTTTTACTTCGATAACAGTGACCAATCTTCTCTGTATAACCAAGGAGGTGCCTATTGTGATATCAATGATCAAAGGCACGAGACTGGGAGGCTGCAAACAAATGACGGTTCTTCACCTTCCAATTCAAATGTTGGAAATGCAGTTGCGGGTGATAACTGCTTTCCCTTCTTGATGACTGAGGGTGGAAATTTGTGGGAGAACTATAGCTTAAAGGTTAATAAAGCATGCCAAAACCAGTGA 1749 0.462 MEMEDHHRHHHQYGITDLRQLVNGPRPTHFPTMPPPPKAELFPGDSNLQAATQQHYEMMMFGRQVADIMPPRCLHDFASTDSATNIAVATPTTTPSASTPPLSCLEAETAGCIGGDASTGRWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRNMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENSNQASVPETNFGSGSLRFHTSSHNNNPSQTNQEMFQSQKHCDSLSLTNSTDLDTSSSDDNDQNSTGRELNKDNDSMEKRRKRVSGRSWKVKIKDFIDSQMRKLVEKQEEWLDKLTKTLEQKEKERVLREEEWRRQESVRLEREHKFWAKERAWIEARDAALMEALHKLTRNEIMKSTHSHEGLMVTGIQIHSENQNEDGSEILNSTAARGAESWPESEIARLQQLRAEMETRYMQSGFSEEVMWEEIATKMACFGYERSALVFKEKWESISSNYARSAKDGSKKRKEDSRSCFYFDNSDQSSLYNQGGAYCDINDQRHETGRLQTNDGSSPSNSNVGNAVAGDNCFPFLMTEGGNLWENYSLKVNKACQNQ 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01764 582 MobiDBLite consensus disorder prediction 212 294 - -
Gma03g01764 582 MobiDBLite consensus disorder prediction 275 292 - -
Gma03g01764 582 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 23 573 - -
Gma03g01764 582 MobiDBLite consensus disorder prediction 212 274 - -
Gma03g01764 582 CDD GT1 425 488 - -
Gma03g01764 582 SMART sant 421 484 IPR001005 -
Gma03g01764 582 SMART sant 118 181 IPR001005 -
Gma03g01764 582 Coils Coil 315 342 - -
Gma03g01764 582 ProSiteProfiles Myb-like domain profile. 114 179 IPR001005 -
Gma03g01764 582 PANTHER - 23 573 - -
Gma03g01764 582 Pfam Myb/SANT-like DNA-binding domain 424 510 IPR044822 -
Gma03g01764 582 Pfam Myb/SANT-like DNA-binding domain 121 207 IPR044822 -
Gma03g01764 582 Gene3D - 425 487 - -
Gma03g01764 582 Gene3D - 122 184 - -
Gma03g01764 582 CDD GT1 121 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01764 Gma-Chr3 43721794 43724328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01764 10 577 Trihelix Transcription Factor Family AT5G03680 43.044 1.97e-140 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma03g01764 Myb_DNA-bind_4 5.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01764 - - gmx:100815903 1141.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01764 03 43721794 43724328 Gma03g01764 03 43721794 43724328 ECH
Gma19g01812 19 47365384 47367857 Gma03g01764 03 43721794 43724328 GST
Gma03g01764 03 43721794 43724328 Gma10g00616 10 6582442 6585520 PCT
Gma03g01764 03 43721794 43724328 Gma02g01922 02 44520114 44520924 PCT
Gma10g00616 10 6582442 6585520 Gma03g01764 03 43721794 43724328 PCT
Gma02g01922 02 44520114 44520924 Gma03g01764 03 43721794 43724328 PCT