Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01759 ATGGAAATGCCTGCCAGAAGATCCATCAACTACTCCCTCCTCAGCCAAACTCCCGACGACAAATTAACGCCGCCGTTGTTCGGTTCCTCCTCCGGCGACGCTAAAATCAACAACAGCAAGTTCGAGAGAGTCTCCGATTGGGACTCCGGCGTCGATCACCGCCAGGGGAATCGGATCGGGAATTTGCACTCCTCGTTTGGGATGCAGCGGCAGTCCAGCGAGAGCAGTTTCGGCGAGAGCTCGCTCTCCGGCGAGTTTTACGCGCCTATTCTGTCGACCGTCGCGGCGAATGAGATCGACGGATTCAGAGGCAGGTTTCCGGGAAATTCGGCAATGAGGAGCGGAGGTTCCTCTGGCAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTATCAGTTACAGCTGGCATTGGCTCTTCGGCTTTCATCGGAGGCCACGTGTGCTGATGATCCCAATTTTCTGGATCCCGTGCCCGATGAATCCGCGTTGAGGCCTTCGTCTTCGTCGTTTTCCGCAGAGGCAGTGTCGCATAGGTTTTGGGTGAATGGATGCCTATTATACTTCGACAAAATTCCTGATGGCTTTTATCTAATTCATGGGATGGATCCATATGTATGGACTGTGTGCACCAATCTGCAGGAAAATGACCGAATTCCTCCACTTGAGACACTAAAATCTATAAATCCTTCTTCTGACTCTTCACTTGAAGTAGTTTTTGTGGATAGACGTAGCGATCCTAGCTTAAGAGAACTGCAAAACAGAGTACAAGACATTTCTTGTTGCTGCATAGAAACAACTGATGTTGTAGACCAGCTTGCGAAGCTGGTTTGCAATTGTATGGGGGGTTCAGCTTCTGTATGGGAAGATGATCTTTTTCCTATATGGAGGGAGCGCATTAATGATCTAAGAGATTGCTTAGGATCTGTTGTTGTACCAATTGGCAGTCTATCTACTGGACTTTGCAGGCATCGTGCTGTATTATTCAAAGTACTAGCTGACACCATTGATTTGCCTTGTCGAATTGCTAAGGGCTGTAAATATTGTTCAAGAGATGATGCCTCCTCATGTCTTGTTCGATTTGGACTTGACAGGGAATACATGGTTGATCTTATTGGGAAGCCGGGTTGCTTATGCGAGCCTGATTCCTTGATCAATGGTCCATCCTCCATTTCATTTTCTTCACCCTTGCGCTTTCCAAGACATAAACCAGCTGAGCCTACCATTGATTTCAGGTCACTGGCCAAACAATATTTCTCAGATTGTATGTCTGCTGAGCTTGTCTTTGATAGTAGTTCTGCAGAACAGTATGAAAGGCAGTACATGGGCAGGAACCCTGGGCCAATTCCAAATGATAACAACAAAAGTTCTCTCGTTCCTCTGCATTCACAACCTTATTGTTCAAGTGCACATGATCGAGGCTCTGAAACATTTAAATCAGGTAACCCTGCTCAGAATGCTGTAGAGCCGACAATGACAAGCCGGGATTCATTGCCTTTAAAGCATAACCGTCCTGGTCATAGAGATACAAAGACCCGACTACTGATTCCTAGCAAACCAACTAGAGAGTTTTCCCTTGATATGGAGGATTTGGACATACCGTGGACTGATCTTGATTTAAAAGGGAGAATAGGATCAGGTTCTTTTGGAACTGTACATCATGCAGAGTGGAATGGCTCGGAGGTTGCTGTTAAAATTCTGATGGAACAAGACTTCAAAGGTGAACGCTTCAAGGAATTCCTGAGGGAGGTTGCAATAATGAAAGGCTTACGGCATCCAAACATTGTTTTACTTATGGGTGCAGTCACTAAGCCTCCTAATCTATCAATTGTCACAGAATATTTGTCAAGGGGTAGCTTGTATAGGCTGTTGCATAAACCTGGTGCCACAGAGATGTTGGATGAGAGACGTAGGCTTAGTATGGCTTATGATGTGGCTAAGGGGATGAATTATCTTCATAAACGCAATCCTCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATATACAGTGAAGGTTGGTGATTTTGGGCTTTCCCGACTAAAGGCAAATACATTTCTCTCATCCAAGTCTGCTGCCGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGTGATGAGCCATCCAATGAGAAGTCAGATGTTTACAGCTTTGGTGTCATCTTGTGGGAGCTCGCAACATTGCAACAGCCTTGGAGTAATTTGAATCCGCCACAGGTTGTGGCGGCTGTTGGCTTTAAGGGAAAAAGACTTGAGATACCACGTGATTTAAATCCTCAATTAGCCTCAATAATTGAGGCTTGTTGGGCCAACGAACCCTGGAAACGCCCTTCTTTTTCAAGTATTATGGATTCTTTGAAAGTATTGCTCAAATCCCCTATGCTTCAACCTGGTCGTCCAAGCATGTCATTACTTACCTGA 2433 0.4587 MEMPARRSINYSLLSQTPDDKLTPPLFGSSSGDAKINNSKFERVSDWDSGVDHRQGNRIGNLHSSFGMQRQSSESSFGESSLSGEFYAPILSTVAANEIDGFRGRFPGNSAMRSGGSSGKSWAQQTEESYQLQLALALRLSSEATCADDPNFLDPVPDESALRPSSSSFSAEAVSHRFWVNGCLLYFDKIPDGFYLIHGMDPYVWTVCTNLQENDRIPPLETLKSINPSSDSSLEVVFVDRRSDPSLRELQNRVQDISCCCIETTDVVDQLAKLVCNCMGGSASVWEDDLFPIWRERINDLRDCLGSVVVPIGSLSTGLCRHRAVLFKVLADTIDLPCRIAKGCKYCSRDDASSCLVRFGLDREYMVDLIGKPGCLCEPDSLINGPSSISFSSPLRFPRHKPAEPTIDFRSLAKQYFSDCMSAELVFDSSSAEQYERQYMGRNPGPIPNDNNKSSLVPLHSQPYCSSAHDRGSETFKSGNPAQNAVEPTMTSRDSLPLKHNRPGHRDTKTRLLIPSKPTREFSLDMEDLDIPWTDLDLKGRIGSGSFGTVHHAEWNGSEVAVKILMEQDFKGERFKEFLREVAIMKGLRHPNIVLLMGAVTKPPNLSIVTEYLSRGSLYRLLHKPGATEMLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVGDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWSNLNPPQVVAAVGFKGKRLEIPRDLNPQLASIIEACWANEPWKRPSFSSIMDSLKVLLKSPMLQPGRPSMSLLT 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01759 810 Gene3D Transferase(Phosphotransferase) domain 1 615 800 - -
Gma03g01759 810 MobiDBLite consensus disorder prediction 9 34 - -
Gma03g01759 810 PRINTS Tyrosine kinase catalytic domain signature 610 623 IPR001245 GO:0004672|GO:0006468
Gma03g01759 810 PRINTS Tyrosine kinase catalytic domain signature 651 669 IPR001245 GO:0004672|GO:0006468
Gma03g01759 810 PRINTS Tyrosine kinase catalytic domain signature 698 708 IPR001245 GO:0004672|GO:0006468
Gma03g01759 810 PRINTS Tyrosine kinase catalytic domain signature 717 739 IPR001245 GO:0004672|GO:0006468
Gma03g01759 810 PRINTS Tyrosine kinase catalytic domain signature 761 783 IPR001245 GO:0004672|GO:0006468
Gma03g01759 810 ProSitePatterns Protein kinases ATP-binding region signature. 542 563 IPR017441 GO:0005524
Gma03g01759 810 ProSiteProfiles Protein kinase domain profile. 536 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01759 810 CDD STKc_MAP3K-like 542 790 - -
Gma03g01759 810 Pfam Protein tyrosine and serine/threonine kinase 537 790 IPR001245 GO:0004672|GO:0006468
Gma03g01759 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Gma03g01759 810 SUPERFAMILY Protein kinase-like (PK-like) 513 790 IPR011009 -
Gma03g01759 810 SMART serkin_6 536 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01759 810 Pfam Ethylene-responsive protein kinase Le-CTR1 171 377 - -
Gma03g01759 810 MobiDBLite consensus disorder prediction 467 510 - -
Gma03g01759 810 MobiDBLite consensus disorder prediction 467 496 - -
Gma03g01759 810 Gene3D Phosphorylase Kinase; domain 1 529 614 - -
Gma03g01759 810 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 110 798 - -
Gma03g01759 810 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 110 798 - -
Gma03g01759 810 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01759 Gma-Chr3 43662426 43675140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01759 1 803 MAP Kinase Kinase Kinase AT5G03730 64.630 0.0 959
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gma03g01759 PK_Tyr_Ser-Thr 1.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01759 K14510 - gmx:100787894 1628.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01759 03 43662426 43675140 Gma03g01759 03 43662426 43675140 ECH
Gma03g01759 03 43662426 43675140 Gma10g00608 10 6472779 6482131 PCT
Gma03g01759 03 43662426 43675140 Gma13g01299 13 27464316 27473935 PCT
Gma10g00608 10 6472779 6482131 Gma03g01759 03 43662426 43675140 PCT
Gma13g01299 13 27464316 27473935 Gma03g01759 03 43662426 43675140 PCT