Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01743 ATGGAACCCAATGCACTAGGTGGTGGAATATTTCCTAACATAAGTAGTGGTTTGCTAGGAGTAGAAAACCCTTTACAACAACAACCAAACCTTCAAAACCAGCAAAACCCCCACCCTTTGCACCATCTCCAAATGGTTTCCTACACCACTAACCACGACACTGACACACACCATCAACAACCACCACCTCAGCAATCAATCAAACATGGCTACAACTTTTCGGCCACTAAATCCAACAAGTCACAAATCACACTCAGTGATGAAGATGAACCAGTGTTCACAGCAGAAGACAATAGCTCCGGAGACCCCAAGAGAAAAGTGTCACCATGGCATAGAATGAAGTGGACGGACACCATGGTAAAGTTCTTAATAATGGCGGTTTATTACATTGGAGACGAGGCTGGTTCAGAAGGCACTGACCCCACCAAGAAGAAAGCCTCTGGGTTGCTTCAAAAGAAAGGGAAATGGAAATCAGTGTCAGGGGGCATGATGGAGAAGGGTTACTATGTGTCTCCTCAGCAATGTGAAGACAAGTTCAATGACTTGAACAAGAGATACAAGAGGGTCAACGACATCCTAGGCAAGGGCACAGCATGTCGGGTGGTGGAGAACCAAACCTTGTTGGACACTATGGATCTGTCACCAAAGATGAAGGAAGAAGTTCGAAAGCTCCTCAACTCAAAGCACTTGTTCTTCAGAGAAATGTGTGCTTACCATAACAGTTGTGGCCACAACAACAACAACAACTGTGGCAGTACTTCCAACGTGCAACAATCAACTGATCAGCCACTACATCAACATAACCATCAACAGCAGCAGTGTTTGCACTCATCAGAAAATGGGGTGGGGAGTCTAAGAATGTTGAAAGAGGATGAGGATGAGGATATTGAGGACGATGATTCGGATGAGTTTTCTGATGAGGATGAAGATGAATCAGGAGAAGGAGGATCAAGGGGTATGGAGGAGGATGAAAATGATCATGTGATGAGGAAGAGAGCAAGGAATAAGGGAGGTTTCGGTGTTTCATCGATATCATCACAGATGATGCAGCAGTTGAATGGTGAAGTGAGTGGTGTGTTGCAAGATGGAGGGAAGAGTGCTTGGGAGAAAAAGCAGTGGATGAAGAAGAAGGTGGTGCAGTTGGAGGAGCAGCAGGTGAGTTATCAAATGCAAGCGTTTGAGATGGAAAAGCAGCGGTTGAAGTGGGCGAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGAAAGATAAGCTTCAAAATGAAAGGAAGAGGTTGGAAATAGAAAGAATGGTCTTGCTACTTCGCCATAAGGAGCTTGAATTGGTTAATGTTCAGCAGCAGCATCAACAGCAACATTCTTCTACCTAG 1368 0.4503 MEPNALGGGIFPNISSGLLGVENPLQQQPNLQNQQNPHPLHHLQMVSYTTNHDTDTHHQQPPPQQSIKHGYNFSATKSNKSQITLSDEDEPVFTAEDNSSGDPKRKVSPWHRMKWTDTMVKFLIMAVYYIGDEAGSEGTDPTKKKASGLLQKKGKWKSVSGGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQTLLDTMDLSPKMKEEVRKLLNSKHLFFREMCAYHNSCGHNNNNNCGSTSNVQQSTDQPLHQHNHQQQQCLHSSENGVGSLRMLKEDEDEDIEDDDSDEFSDEDEDESGEGGSRGMEEDENDHVMRKRARNKGGFGVSSISSQMMQQLNGEVSGVLQDGGKSAWEKKQWMKKKVVQLEEQQVSYQMQAFEMEKQRLKWARFSSKKEREMEKDKLQNERKRLEIERMVLLLRHKELELVNVQQQHQQQHSST 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01743 455 MobiDBLite consensus disorder prediction 51 107 - -
Gma03g01743 455 PANTHER F16F4.11 PROTEIN-RELATED 1 455 - -
Gma03g01743 455 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 455 - -
Gma03g01743 455 MobiDBLite consensus disorder prediction 291 317 - -
Gma03g01743 455 Coils Coil 408 435 - -
Gma03g01743 455 MobiDBLite consensus disorder prediction 291 328 - -
Gma03g01743 455 Pfam Myb/SANT-like DNA-binding domain 112 237 IPR044822 -
Gma03g01743 455 MobiDBLite consensus disorder prediction 51 88 - -
Gma03g01743 455 Gene3D - 115 188 - -
Gma03g01743 455 MobiDBLite consensus disorder prediction 253 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01743 Gma-Chr3 43521915 43523282 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma03g01743 Myb_DNA-bind_4 1.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01743 - - gmx:100808934 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01743 03 43521915 43523282 Gma03g01743 03 43521915 43523282 ECH
Gma19g01795 19 47180735 47182637 Gma03g01743 03 43521915 43523282 GST
Gma03g01743 03 43521915 43523282 Gma10g00596 10 6284317 6285882 PCT
Gma03g01743 03 43521915 43523282 Gma13g01286 13 27260612 27262434 PCT
Gma10g00596 10 6284317 6285882 Gma03g01743 03 43521915 43523282 PCT
Gma13g01286 13 27260612 27262434 Gma03g01743 03 43521915 43523282 PCT