Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01740 atggTTTTGAATTTGCTGAGTGAAGAAGCACTCGAGTTCTCACGCCTAAATCTGAAACACTCTCGTGCCTTACCTTTAAAGCTCTGTTGCCTTGTCGTATTGAAGCTTTCATCGCCGTCGTCTTCTCAAGACCATCGTGTCCATCGACGTCGAAGTGCGAACTCCTCCACCACAGGACTCTATTCATTAGAAGGCTTGGACGCAGCTTTGTTCTTGTCGCAGTTTAAAATGCTTCCCAAATTAAAAATATTCACTGGCAAACCAAGGGTAATCCTAGCTCTTAGGGTTTACACCGAGCAGCGACACCTCCCTCCCGCAGTAGCCATGGTTCTCAAAACTGAACTATGCCGATTCAGTGGTGCCAAGATCTACCCCGGAAAGGGCATCAGATTTGTTCGTGGTGATTCTCAGgttttcctgtttgccaactcaaaatgtaagcggtatttccacaaccgcctgaagccctcaaagctcacctggactgctatgtacagaaagcaacacaaaaaggacattgctcaagaagctgtgaagaagaggagacgcgctgccaaaaagccttactctaggtccattgttggtgccactctggaagttatccagaaaaagagagctgagaagccagaagttcgagatgcagctagggaagctgctcttcgtgaaattaaggagaggatcaagaaaacaaaggatgagaagaaggctaagaaagcagaAGTTACAGCCAAGTCACAAAAAGCAGGAGGGAAAGGCATTTCTAAGGGTGCTATGCCCAAAGGTCCCAAACTCGGTGGTGGAGGCGGGAAACGCTGA 816 0.2978 MVLNLLSEEALEFSRLNLKHSRALPLKLCCLVVLKLSSPSSSQDHRVHRRRSANSSTTGLYSLEGLDAALFLSQFKMLPKLKIFTGKPRVILALRVYTEQRHLPPAVAMVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRAAKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVTAKSQKAGGKGISKGAMPKGPKLGGGGGKR 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01740 271 SMART 4TRASH 116 154 IPR011017 -
Gma03g01740 271 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 114 166 - -
Gma03g01740 271 Pfam Ribosomal protein L24e 112 175 IPR000988 -
Gma03g01740 271 Coils Coil 220 244 - -
Gma03g01740 271 ProSitePatterns Ribosomal protein L24e signature. 118 135 IPR023442 -
Gma03g01740 271 Gene3D - 177 246 - -
Gma03g01740 271 Gene3D Ribosomal protein L24e 111 172 IPR038630 -
Gma03g01740 271 PANTHER 60S RIBOSOMAL PROTEIN L24 106 271 IPR000988 -
Gma03g01740 271 MobiDBLite consensus disorder prediction 225 271 - -
Gma03g01740 271 MobiDBLite consensus disorder prediction 225 244 - -
Gma03g01740 271 CDD Ribosomal_L24e_L24 111 164 IPR000988 -
Gma03g01740 271 PANTHER 60S RIBOSOMAL PROTEIN L24 106 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01740 Gma-Chr3 43493695 43498687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01740 109 264 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 84.076 1.40e-81 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01740 K02896 - gmx:100499979 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01740 03 43493695 43498687 Gma03g01740 03 43493695 43498687 ECH
Gma19g01792 19 47157476 47159521 Gma03g01740 03 43493695 43498687 GST
Gma03g01740 03 43493695 43498687 Gma10g00613 10 6544921 6547027 PCT
Gma10g00613 10 6544921 6547027 Gma03g01740 03 43493695 43498687 PCT