Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma03g01702 | ATGCTCCTCCAAACAACCTGCATTTTTCTACTCTCAGTTCTTCTGAGCTCGTTTTCACCACTTGGAACAGCAATGCTCAACCTCACTCTTCCCGGAGCTCATCCTGACCCCGAAGCCGTTGCCCACGAAGTTCATAGGAAGGTTAATGCTTCAATCGCAAGAAGGGAAATGCTATCAGTGTCTGAAAAAGACGGGTCTTCGTGCCTAACGGGAAATCCCATCGATGATTGTTGGAAATGTGACCCAGATTGGCCAAATAACCGGCAGAGGCTAGCTGACTGCGTCATTGGGTTCGGTCAGTACGCAAAGGGAGGAAAAGGTGGTGAATTTTACGTTGTTACTGATTCCTCTGATGATGACCCTGTGAACCCAAAACCTGGCACGCTTAGATACGCAGTGATACAGAACGAGCCACTGTGGATCGTGTTCCCTAGTAACATGATGATTAAGCTGTCTCAGGAACTGATTTTTAACAGCTACAAGACCATTGATGGGCGTGGAGCTGATGTGCACATTGTGGGAGGAGGGTGCATTACTTTGCAGTTTATAAGCAATGTCATCATTCACAACATTCACATCCATCATTGTCATCCCTCAGGGAACACAAACGTTCGGTCAAGCCCGGAGCACTACGGATTCCGGACAGAATCAGACGGAGACGGCATCTCCATCTTCGGGTCGAAGGACATATGGATCGACCACTGCACCCTTTCACGGTGCAAGGACGGTCTGATCGACGCGGTGATGGGGTCCACAGGGATAACCATCTCCAACAACATGCTATCCCACCACAACGAGGTCATGCTACTCGGCCACAGCGACGACTACCTCCCTGACTCCGGAATGCAGGTCACCATCGCCTTCAACCACTTCGGGGAGAAGCTCGTCCAGCGCATGCCCCGCTGCCGGAGGGGATACATCCACGTCGTCAACAACGACTTCACCGAGTGGGAGATGTACGCCATTGGTGGCAGCGGCGAGCCCACCATAAACAGCCAGGGTAACCGTTACATGGCACCGGAAAACCCCTTCGCTAAGGAAGTTACTAAGAGAGTCGACACGCAACAGTCCAAGTGGAAGGGATGGAACTGGCGCTCCGAGGGTGACATTCTCCTGAACGGGGCCTTTTTTGTTGCGTCTGGTGAAGAACTTGAAGTTAAGTATGAGAAGGCATACAGCGTCCAACCCAAATCCGCTGATCGCATCTCTTTTCTCACCATGTCCGCAGGTGTTCTCGGTAATGCCAGGGACAACAACCTTGGCATGTGGAGCAGAGGACCTGCCGATGACACCACGGAGTCCGGAATGGAATACACGGATGACATGTCCACCACTGCAACAATGCTTCTGTCTTCTTTTTTGCTTCTCTTCTTCTTGTCTTACACGATATTACGCTTGACGGTTATTCTTTAA | 1413 | 0.5096 | MLLQTTCIFLLSVLLSSFSPLGTAMLNLTLPGAHPDPEAVAHEVHRKVNASIARREMLSVSEKDGSSCLTGNPIDDCWKCDPDWPNNRQRLADCVIGFGQYAKGGKGGEFYVVTDSSDDDPVNPKPGTLRYAVIQNEPLWIVFPSNMMIKLSQELIFNSYKTIDGRGADVHIVGGGCITLQFISNVIIHNIHIHHCHPSGNTNVRSSPEHYGFRTESDGDGISIFGSKDIWIDHCTLSRCKDGLIDAVMGSTGITISNNMLSHHNEVMLLGHSDDYLPDSGMQVTIAFNHFGEKLVQRMPRCRRGYIHVVNNDFTEWEMYAIGGSGEPTINSQGNRYMAPENPFAKEVTKRVDTQQSKWKGWNWRSEGDILLNGAFFVASGEELEVKYEKAYSVQPKSADRISFLTMSAGVLGNARDNNLGMWSRGPADDTTESGMEYTDDMSTTATMLLSSFLLLFFLSYTILRLTVIL | 470 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma03g01702 | 470 | SMART | amb_all | 146 | 343 | IPR002022 | - | |
Gma03g01702 | 470 | Gene3D | - | 71 | 413 | IPR012334 | - | |
Gma03g01702 | 470 | PANTHER | PECTATE LYASE 18-RELATED | 6 | 428 | IPR045032 | GO:0030570 | |
Gma03g01702 | 470 | PANTHER | PECTATE LYASE 12-RELATED | 6 | 428 | - | - | |
Gma03g01702 | 470 | SUPERFAMILY | Pectin lyase-like | 67 | 399 | IPR011050 | - | |
Gma03g01702 | 470 | Pfam | Pectate lyase | 155 | 331 | IPR002022 | - | |
Gma03g01702 | 470 | PRINTS | Pollen allergen Amb family signature | 94 | 111 | IPR018082 | - | |
Gma03g01702 | 470 | PRINTS | Pollen allergen Amb family signature | 118 | 143 | IPR018082 | - | |
Gma03g01702 | 470 | PRINTS | Pollen allergen Amb family signature | 154 | 170 | IPR018082 | - | |
Gma03g01702 | 470 | PRINTS | Pollen allergen Amb family signature | 218 | 239 | IPR018082 | - | |
Gma03g01702 | 470 | PRINTS | Pollen allergen Amb family signature | 298 | 317 | IPR018082 | - | |
Gma03g01702 | 470 | PRINTS | Pollen allergen Amb family signature | 320 | 339 | IPR018082 | - | |
Gma03g01702 | 470 | PRINTS | Pollen allergen Amb family signature | 362 | 386 | IPR018082 | - | |
Gma03g01702 | 470 | PRINTS | Pollen allergen Amb family signature | 391 | 414 | IPR018082 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma03g01702 | Gma-Chr3 | 43191269 | 43194435 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma03g01702 | 1 | 469 | Polysaccharide Lyase | AT3G53190 | 73.739 | 0.0 | 693 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma03g01702 | K01728 | - | gmx:100775595 | 924.465 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma03g01702 | 03 | 43191269 | 43194435 | Gma03g01702 | 03 | 43191269 | 43194435 | ECH | |
Gma03g01702 | 03 | 43191269 | 43194435 | Gma13g01251 | 13 | 26824122 | 26829531 | PCT | |
Gma13g01251 | 13 | 26824122 | 26829531 | Gma03g01702 | 03 | 43191269 | 43194435 | PCT |