Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01695 ATGGATTCAACACTATTTCTAAACCCCGCAGACTTTGAATTACCCCACGACTACGACGAAAACGCAGAAGCAAATCTCATTGAAATTCCCGCAGACTTTGGATTATCCCacgacgacgacgacgacgacgaaaccgacgatgaagaagaagacgacgacgacgacgaagacgaagaGTATGTTCCCGCCGGGGCGCCTCCTAGGGTTTCGCACGACGCTCCCCGTGTCAGTACATCCAACAGCGAAGTCGTTACCCTCATCGAATCGCAGAACAAGCGCCGTAGAACCGAAGGAGGCGAGGCTTCTTGTTCCTTCGCGAATGGGAGCCTGAGCCAAGAGAACGAGTGGGCCAGCCCTGACGTTGACGGTCTCCTTTGCCCTATTTGTATGGACGCTTGGACCAATAACGGCGAGCATCACATCTGCTGTCTCCCTTGTGGACACATATATGGCATGTCTTGCATCAAAAAATGGCTTCAACACCGCAGAAATTCCAATAAGTGTCCTCAATGTAAAGTGAAATGCTCGTTGAAGGATGTGAGGAAACTCTATGCCTCTCAAGTAGTGGCCGTCGAGGAAGAAAATCAGAAGAGAATTCGGTCACTTGAGGCCAAATGTGCTGCCCTTGAAAGCAAGGTAAGTAATTGGCACAAGAAGGAAACTGGATGGCAGAAAAGGGAAGCTGCATTGAGTTTTCAAGTTCAGAAGCTTACAGAGGGAAGTGATCGCCACAAGAAAGAAGCCGGATGGCAGAAGAAGGAAGCTGCATTGAATCTTCAAGTTCAGAAGCTTACTGAGAGAAACACTTATTTGGAGATGCTACTAGATATGCAGAGCAGGCAATTGATGTTCAATTTTGAATTGCAGAAAACGTTTGATCTGGATGGTGCTCGTGTTTTTGATATGGACATTTCAAATCAAATTTTATTAATTGCACAAAAGCGAAAGGCAATAGGTGGAATGCACTTGTTAACTAAAATGAGCTTGatgtctccatttgagatgcaagacatcttactgccttctggcacaaatggtgttaaagacctacacatttctgcttctcatagtagtagtagcctggccctcttttcttctctaggaaagaaattatcagtgctcagcttggacagcggcaaccttgttgtcaattatgacctacaggttcctgcatggtcttgttcatgggatctcaacaattcacattacatatatgctggactacagaatggttctgtcttggtgtttgatatgcgccaaactgcAGGACCCATGAAATCCCTTGTTGGTTTGACTAGCAACCCTGTGCATACTGTACATGCTCTTGCACAAACTTCAAGTTTGTCTTCTGGTGTTAAAACCATCCTATCTGCATCTGCTGTTGGCCTTTGTCAGTGGAACATTGATTCTGAAGAGCGGCCGCTTATGGTTCCTGAAACTGATAATCAAGGAGTCTGCATATCCCTTGCCTATTGCCCTAGCAGTGATGACATTGTTGCTTCATACCGACCGAAATATGACATGTCCATGGATCTGCGTCACTCTCAACCATCGCCCACTCCTCCTAGTACGCAACACGGAGTACAGGGCACTCATGTCTTGTTCAATAGAATGGGCAGTCATCATTTCCAAAAGGTGGGTTCCTCATATGCCAGCGTAAGTAAATTTCTACTACCAAAATGTGTAATTATGGACATAGAGGATCAGAGCAGATTGTTTGCATCTTTGAATGAAGATACACGTGATTTGGTCTTGCATGCGTTGCCATCTTTTAGAGTTCTTCAGCAATTGAAAATGCAAGCTCAGGGCCGTGATCTTAGGTACTCACCTAGCCATGGAATTCTTGGTTGTTTAAGTGAGAACACATTGCAGCTTTTTTCCAAACGCTCGTGGTAA 1896 0.3697 MDSTLFLNPADFELPHDYDENAEANLIEIPADFGLSHDDDDDDETDDEEEDDDDDEDEEYVPAGAPPRVSHDAPRVSTSNSEVVTLIESQNKRRRTEGGEASCSFANGSLSQENEWASPDVDGLLCPICMDAWTNNGEHHICCLPCGHIYGMSCIKKWLQHRRNSNKCPQCKVKCSLKDVRKLYASQVVAVEEENQKRIRSLEAKCAALESKVSNWHKKETGWQKREAALSFQVQKLTEGSDRHKKEAGWQKKEAALNLQVQKLTERNTYLEMLLDMQSRQLMFNFELQKTFDLDGARVFDMDISNQILLIAQKRKAIGGMHLLTKMSLMSPFEMQDILLPSGTNGVKDLHISASHSSSSLALFSSLGKKLSVLSLDSGNLVVNYDLQVPAWSCSWDLNNSHYIYAGLQNGSVLVFDMRQTAGPMKSLVGLTSNPVHTVHALAQTSSLSSGVKTILSASAVGLCQWNIDSEERPLMVPETDNQGVCISLAYCPSSDDIVASYRPKYDMSMDLRHSQPSPTPPSTQHGVQGTHVLFNRMGSHHFQKVGSSYASVSKFLLPKCVIMDIEDQSRLFASLNEDTRDLVLHALPSFRVLQQLKMQAQGRDLRYSPSHGILGCLSENTLQLFSKRSW 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01695 631 Gene3D - 250 506 IPR015943 GO:0005515
Gma03g01695 631 MobiDBLite consensus disorder prediction 35 60 - -
Gma03g01695 631 Pfam Ring finger domain 126 172 IPR001841 -
Gma03g01695 631 SMART ring_2 126 171 IPR001841 -
Gma03g01695 631 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 36 627 - -
Gma03g01695 631 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 238 IPR013083 -
Gma03g01695 631 ProSiteProfiles Zinc finger RING-type profile. 126 172 IPR001841 -
Gma03g01695 631 SUPERFAMILY WD40 repeat-like 284 578 IPR036322 GO:0005515
Gma03g01695 631 SUPERFAMILY RING/U-box 114 178 - -
Gma03g01695 631 MobiDBLite consensus disorder prediction 1 81 - -
Gma03g01695 631 CDD mRING-C3HGC3_RFWD3 122 172 - -
Gma03g01695 631 PANTHER RFWD3 PROTEIN 36 627 IPR037381 GO:0004842|GO:0005634|GO:0016567|GO:0036297
Gma03g01695 631 Coils Coil 192 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01695 Gma-Chr3 43129673 43136182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01695 125 212 C3H Transcription Factor Family AT4G01270 31.193 7.14e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01695 K15691 - gmx:100818898 1211.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01695 03 43129673 43136182 Gma03g01695 03 43129673 43136182 ECH
Gma19g01746 19 46775913 46778182 Gma03g01695 03 43129673 43136182 GST