Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma03g01687 | ATGTCAAAAGATTCTGAGGAGATAAAAACCATTGAGCAGTGGAAATGGACCGAAATGCAAGGCCTTGAGCTTGTTCCTGAAGAGGGTGCTGCTGCTGCACCTTCACAACATCACCAACTTCCAATGGAAATGAACACTTCTGAACCACCCAACAAAGATGTTGTTGGTGCTTCTTCTTCTTCTGCAGCAGTTACTAATGGGGAGAAGAAAGAGAAAGAGAAAGAGAGTGTTCCCTCTGTTGGGTTTGGAGAGCTTTTCAGATTCGCTGATGGGTTGGACTACGTTCTCATGGGAATTGGAACCGTTGGAGCAGTTGTGCACGGTTGTTCTCTGCCTCTCTTTCTTCGCTTCTTTGCGGATCTTGTCAATTCCTTTGGCTCCAATGCTAATGATGTCGACAAGATGACTCAGGAAGTGGTCAAGTATGCATTTTACTTCCTGGTGGTGGGGGCTGCTATATGGGCTTCTTCATGGGCAGAGATTTCGTGTTGGATGTGGAGCGGGGAGCGGCAATCGACCACGATGAGAATCAAGTATCTAGAGGCTGCGTTGAACCAGGACATTCAGTTCTTCGACACCGAGGTTCGGACATCCGACGTGGTTTTCGCCATCAACACCGATGCTGTCATGGTCCAGGATGCCATTAGTGAGAAGTTGGGGAATTTCATTCACTACATGGCCACCTTTGTTTCTGGCTTTGTTGTGGGTTTCACTGCTGTGTGGCAATTGGCTTTGGTGACTCTTGCTGTTGTCCCTATGATAGCTGTGATTGGAGGCATTCACACCGCCACCTTGGCTAAGCTCTCTGGCAAGAGCCAGGAAGCTCTTTCTCAAGCTGGCAACATTGTGGAACAGACGGTTGCACAAATCCGGGTAGTGTTAGCCTTTGTTGGGGAGTCCAGAGCATTGCAGTCTTATTCATCAGCCTTGAGGATCGCACAGAAGATTGGCTACAAAACTGGGTTTGCAAAGGGAATGGGATTGGGTGCTACTTACTTTGTTGTTTTCTGCTGTTACGCGCTTCTGCTGTGGTATGGAGGCTATCTGGTTAGGCACCACGCCACCAACGGAGGACTTGCCATTGCAACCATGTTTGCTGTTATGATTGGTGGATTGGGTTTGGGGCAATCTGCACCAAGCATGGCTGCGTTTACAAAGGCCAGAGTTGCTGCTGCGAAGATTTTCCGTATAATTGATCACAAGCCGAATATTGATCGAAATAGTGAATCTGGCATCGAACTAGACACAGTTACTGGACTTGTGGAGCTGAAAAATGTTGACTTTTCTTATCCATCTAGGCCCGAGGTTCAGATCCTCAATGACTTCTCCTTGAATGTACCTGCCGGCAAGACCATAGCTTTGGTGGGTAGCAGTGGCTCTGGCAAGAGCACCGTTGTATCCCTCATTGAGAGATTCTATGACCCAACTTCAGGACAAGTTCTGTTAGATGGGCATGACATTAAAACTTTGAAGCTTAGATGGTTGAGGCAGCAGATAGGACTAGTGAGCCAAGAGCCTGCATTGTTTGCGACCACAATACGAGAAAATATACTGTTGGGTAGGCCTGATGCAGACCAAGTTGAGATTGAAGAAGCTGCCAGGGTTGCTAATGCTCATTCCTTCATCATTAAACTTCCTGATGGCTATGAAACACAGGTAGGAGAAAGAGGGCTGCAACTTTCTGGAGGGCAAAAACAGAGAATAGCAATAGCAAGGGCAATGCTGAAAAACCCTGCAATTCTTCTCCTAGACGAGGCAACAAGTGCATTGGACTCAGAGTCAGAAAAGCTTGTGCAAGAAGCCCTTGACCGGTTCATGATTGGCCGAACAACTCTTGTAATTGCCCATCGTCTCTCCACAATTCGCAAAGCTGACCTTGTAGCTGTACTTCAGCTAGGAAGTGTTTCTGAAATTGGAACTCATGATGAGCTCTTCTCGAAAGGTGAAAATGGAGTCTATGCCAAGCTTATAAAGATGCAGGAGATGGCTCATGAAACTGCCGTGAATAATGCTAGAAAGAGTAGTGCAAGGCCTTCAAGTGCCAGAAACTCCGTAAGCTCACCAATAATTGCTAGGAATTCTTCTTATGGACGGTCACCATACTCGCGTAGGCTATCTGATTTCTCTACATCTGATTTTAGTCTTTCCCTTGATGCTTCACATCCAAGTTACAGGCTTGAAAAGCTTGCTTTCAAAGAGCAAGCTAGTTCCTTCTGGAGACTTGCAAAAATGAACTCTCCTGAATGGCTTTATGCTTTAATTGGCTCTATAGGGTCTGTAGTTTGTGGATCCCTTAGTGCCTTCTTTGCTTATGTTCTAAGTGCTGTCCTCAGTGTGTATTACAATCCAGACCACAGATACATGATCCGCGAAATAGAAAAGTACTGCTACTTGTTGATTGGCCTTTCATCAACTGCACTTCTCTTCAACACATTGCAACACTTCTTCTGGGACATTGTTGGGGAAAATCTTACCAAACGTGTGAGAGAGAAAATGCTGATGGCAGTGCTCAAAAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCCAGGATTGCTGCAAGGCTGGCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGATCGAATTTCTGTAATTGTGCAGAACACTGCACTTATGCTAGTTGCCTGTACAGCAGGATTTGTGTTGCAGTGGCGCCTTGCCCTTGTCCTCGTAGCTGTCTTTCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACCGGTTTCTCTGGTGACCTGGAAGCTGCTCATGCCAAGGCTACACAACTTGCAGGAGAAGCTATAGCCAATGTAAGGACAGTTGCAGCCTTCAATTCAGAAACAAAAATTGTTGGCCTTTTCACCACCAATCTCCAAGCTCCACTACAGCGTTGTTTTTGGAAGGGACAAATTTCTGGAAGTGGATATGGTGTAGCTCAGTTTGCACTTTATGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTAGTGAAGCATGGCATCTCTGACTTCTCTAAAACAATCCGAGTTTTTATGGTCCTAATGGTTTCTGCAAATGGTGCTGCTGAAACTTTAACACTGGCTCCTGACTTTATCAAAGGAGGCCAGGCCATGAGGTCAGTTTTCGAACTCCTTGACCGCAGAACTGAAATTGAGCCTGATGATCAAGATGCTACTCTTGTTCCTGATCGTCTTCGTGGTGAAGTTGAACTTAAGCATGTAGACTTCTCGTATCCAACTCGCCCGGATATGCCAGTTTTTCGTGACCTCAGTCTTCGTGCAAGAGCTGGTAAAACTCTTGCCCTTGTAGGACCTAGTGGCTGTGGTAAGAGCTCAATTATTGCACTTATACAAAGATTCTATGATCCAACATCTGGTCGGGTCATGATTGATGGCAAGGACATCAGGAAATACAACCTCAAGTCCTTAAGAAGGCACATTTCTGTGGTACCTCAGGAGCCATGCTTGTTTGCTACTACTATTTATGAAAACATCGCTTATGGGCATGAGTCAGCCACTGAAGCTGAGATAATTGAAGCTGCAACTCTTGCCAATGCACACAAGTTCATATCTGGTTTGCCAGATGGATACAAAACATTTGTTGGGGAGAGAGGTGTTCAACTATCCGGGGGACAAAAGCAGAGAATAGCCGTTGCTCGGGCTTTTTTGAGGAAGGCTGAACTTATGCTTCTTGATGAGGCCACAAGTGCACTTGATGCTGAATCAGAGAGGTCTGTTCAGGAGGCTCTAGACCGCGCCTCCTCAGGAAAAACAACTATCATCGTTGCACATAGGCTATCAACAGTCAGGAATGCCAATCTGATTGCTGTGATTGATGATGGGAAAGTAGCCGAGCAAGGCTCCCATTCACAGTTGTTGAAAAATCACCCGGATGGGATTTATGCGCGCATGATTCAGTTACAAAGGTTCACACACAGCCAAGTCATTGGAATGGCCTCAGGTTCAAGCTCTTCAACAAGACCAAAAGATGATGAAAGAGAAGGCTAG | 4029 | 0.4589 | MSKDSEEIKTIEQWKWTEMQGLELVPEEGAAAAPSQHHQLPMEMNTSEPPNKDVVGASSSSAAVTNGEKKEKEKESVPSVGFGELFRFADGLDYVLMGIGTVGAVVHGCSLPLFLRFFADLVNSFGSNANDVDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWSGERQSTTMRIKYLEAALNQDIQFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTATLAKLSGKSQEALSQAGNIVEQTVAQIRVVLAFVGESRALQSYSSALRIAQKIGYKTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHATNGGLAIATMFAVMIGGLGLGQSAPSMAAFTKARVAAAKIFRIIDHKPNIDRNSESGIELDTVTGLVELKNVDFSYPSRPEVQILNDFSLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPDGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQLGSVSEIGTHDELFSKGENGVYAKLIKMQEMAHETAVNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPSYRLEKLAFKEQASSFWRLAKMNSPEWLYALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPDHRYMIREIEKYCYLLIGLSSTALLFNTLQHFFWDIVGENLTKRVREKMLMAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSETKIVGLFTTNLQAPLQRCFWKGQISGSGYGVAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGQAMRSVFELLDRRTEIEPDDQDATLVPDRLRGEVELKHVDFSYPTRPDMPVFRDLSLRARAGKTLALVGPSGCGKSSIIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHISVVPQEPCLFATTIYENIAYGHESATEAEIIEAATLANAHKFISGLPDGYKTFVGERGVQLSGGQKQRIAVARAFLRKAELMLLDEATSALDAESERSVQEALDRASSGKTTIIVAHRLSTVRNANLIAVIDDGKVAEQGSHSQLLKNHPDGIYARMIQLQRFTHSQVIGMASGSSSSTRPKDDEREG | 1342 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma03g01687 | 1342 | Gene3D | ABC transporter type 1, transmembrane domain | 732 | 1041 | IPR036640 | GO:0005524|GO:0016021 | |
Gma03g01687 | 1342 | Gene3D | ABC transporter type 1, transmembrane domain | 1042 | 1319 | IPR036640 | GO:0005524|GO:0016021 | |
Gma03g01687 | 1342 | Gene3D | ABC transporter type 1, transmembrane domain | 84 | 673 | IPR036640 | GO:0005524|GO:0016021 | |
Gma03g01687 | 1342 | Pfam | ABC transporter | 1095 | 1243 | IPR003439 | GO:0005524 | |
Gma03g01687 | 1342 | Pfam | ABC transporter | 439 | 588 | IPR003439 | GO:0005524 | |
Gma03g01687 | 1342 | Gene3D | - | 1065 | 1316 | IPR027417 | - | |
Gma03g01687 | 1342 | Gene3D | - | 411 | 661 | IPR027417 | - | |
Gma03g01687 | 1342 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 97 | 1319 | IPR039421 | - | |
Gma03g01687 | 1342 | MobiDBLite | consensus disorder prediction | 39 | 65 | - | - | |
Gma03g01687 | 1342 | ProSitePatterns | ABC transporters family signature. | 560 | 574 | IPR017871 | GO:0005524 | |
Gma03g01687 | 1342 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1076 | 1312 | IPR003439 | GO:0005524 | |
Gma03g01687 | 1342 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 412 | 660 | IPR027417 | - | |
Gma03g01687 | 1342 | MobiDBLite | consensus disorder prediction | 27 | 75 | - | - | |
Gma03g01687 | 1342 | Pfam | ABC transporter transmembrane region | 98 | 371 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma03g01687 | 1342 | Pfam | ABC transporter transmembrane region | 754 | 1023 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma03g01687 | 1342 | CDD | ABC_MTABC3_MDL1_MDL2 | 1076 | 1315 | - | - | |
Gma03g01687 | 1342 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 742 | 1058 | - | - | |
Gma03g01687 | 1342 | SMART | AAA_5 | 448 | 634 | IPR003593 | - | |
Gma03g01687 | 1342 | SMART | AAA_5 | 1103 | 1295 | IPR003593 | - | |
Gma03g01687 | 1342 | CDD | ABC_MTABC3_MDL1_MDL2 | 421 | 660 | - | - | |
Gma03g01687 | 1342 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 421 | 657 | IPR003439 | GO:0005524 | |
Gma03g01687 | 1342 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 753 | 1040 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma03g01687 | 1342 | ProSitePatterns | ABC transporters family signature. | 1215 | 1229 | IPR017871 | GO:0005524 | |
Gma03g01687 | 1342 | SUPERFAMILY | ABC transporter transmembrane region | 740 | 1060 | IPR036640 | GO:0005524|GO:0016021 | |
Gma03g01687 | 1342 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 97 | 394 | - | - | |
Gma03g01687 | 1342 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1067 | 1315 | IPR027417 | - | |
Gma03g01687 | 1342 | MobiDBLite | consensus disorder prediction | 1323 | 1342 | - | - | |
Gma03g01687 | 1342 | PANTHER | ABC TRANSPORTER B FAMILY MEMBER 1 | 97 | 1319 | - | - | |
Gma03g01687 | 1342 | SUPERFAMILY | ABC transporter transmembrane region | 85 | 405 | IPR036640 | GO:0005524|GO:0016021 | |
Gma03g01687 | 1342 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 99 | 386 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma03g01687 | Gma-Chr3 | 43042820 | 43048888 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma03g01687 | 70 | 1337 | Calmodulin-binding Proteins | AT2G36910 | 89.362 | 0.0 | 2320 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma03g01687 | K05658 | - | gmx:100817829 | 2523.43 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma03g01687 | 03 | 43042820 | 43048888 | Gma03g01687 | 03 | 43042820 | 43048888 | ECH | |
Gma19g01739 | 19 | 46696251 | 46703059 | Gma03g01687 | 03 | 43042820 | 43048888 | GST |