Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01679 ATGAAGTGTTTTCCATTCTCGTATGGAGAGAAAAAAGATGAACCGAAAGGCTTGCAGTTGCAGTCAACATCGGGTCGATCTGACAATTCCATGTGTGTTGAGGCTGAGGTTAGAAGATCCGGTTCTGAGTTAAATTCTCAGGATGTTTCGGACAATGGCAGCTCAGAATCCCAGAGGAGGAATGCAATTCCCAGTTTGTCCCAGAGACCCAGCAACCTCAGAGTGTTTACTGTATCTGAACTGAAATCAGCCACCAAGAATTTCAGTCGCTCTGTTATGATCGGAGAGGGTGGGTTTGGGTGTGTCTACCTGGGATTGATAAGAAGCGCAGAGGACTCCTCCAGAAGAATTGAAGTTGCAGTTAAACAACTTAGTAAAAGAGGAATGCAGGGCCATAGGGAATGGGTGACAGAAGTGAATGTTCTGGGCATTGTTGAGCATCCCAATCTTGTGAAACTAGTGGGTTACTGTGCTGATGATGATGAAAGAGGAATCCAGAGGCTTCTAATTTATGAATACATGCCAAACAGAAGTGTGGAACACCATTTATCTCACCGATCAGAGACTCCTCTCCCATGGACTAGGAGATTAAAAATAGCTCGAGATGCAGCTCGTGGGTTAACATACCTGCATGAGGAAATGGATTTCCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTATTGGATGAACAGTGGAATGCAAAGCTATCAGACTTTGGGTTAGCAAGGTTGGGACCATCAGATGGACTGACTCATGTCTCAACGGCGGTTGTAGGAACAATGGGATATGCCGCTCCTGAATATGTTCAAACCGGACGTCTAACTTCAAAGAATGATGTATGGAGCTACGGTGTCTTCCTTTATGAACTCATCACTGGTAGGCGCCCTTTAGATCGAAATCGCCCCAGGCGTGAGCAGAAGTTGTTGGAATGGATAAGGCCATACCTATCAGATGGGAAGAAATTTCAACTAATATTAGATCCAAGACTTGATAAGAAACAAGTCTTCAAGTCAGCCCAGAGACTCGCTATGATTGCTAACCAATGCTTGGCAAAAAATCCCAAGAATCGCCCAAAGATGAGTGAGGTATTGGAAATGGTAAATGGAATGGTAGAATCATCATCCAGTTCTAGTCCACAGTTGCCCCTGAGGAGTGTGGTGACATTGGAAGCTTCCCAGGATACTGAAACAAATAACAAGAAACGAACCATGGATCAGAAGCTCGGAGAAAGTAATTGGTTTGTTAGGATGTGGAGACCAAAGCTTGTAAGAACATGCTGA 1287 0.439 MKCFPFSYGEKKDEPKGLQLQSTSGRSDNSMCVEAEVRRSGSELNSQDVSDNGSSESQRRNAIPSLSQRPSNLRVFTVSELKSATKNFSRSVMIGEGGFGCVYLGLIRSAEDSSRRIEVAVKQLSKRGMQGHREWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSHRSETPLPWTRRLKIARDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYVQTGRLTSKNDVWSYGVFLYELITGRRPLDRNRPRREQKLLEWIRPYLSDGKKFQLILDPRLDKKQVFKSAQRLAMIANQCLAKNPKNRPKMSEVLEMVNGMVESSSSSSPQLPLRSVVTLEASQDTETNNKKRTMDQKLGESNWFVRMWRPKLVRTC 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01679 428 Gene3D Phosphorylase Kinase; domain 1 68 173 - -
Gma03g01679 428 Gene3D Transferase(Phosphotransferase) domain 1 174 389 - -
Gma03g01679 428 PANTHER KINASE 1B 7 423 - -
Gma03g01679 428 Pfam Protein tyrosine and serine/threonine kinase 93 367 IPR001245 GO:0004672|GO:0006468
Gma03g01679 428 MobiDBLite consensus disorder prediction 1 17 - -
Gma03g01679 428 SUPERFAMILY Protein kinase-like (PK-like) 63 369 IPR011009 -
Gma03g01679 428 MobiDBLite consensus disorder prediction 40 66 - -
Gma03g01679 428 ProSiteProfiles Protein kinase domain profile. 88 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01679 428 CDD STKc_IRAK 94 372 - -
Gma03g01679 428 PANTHER OS01G0588500 PROTEIN-RELATED 7 423 - -
Gma03g01679 428 ProSitePatterns Protein kinases ATP-binding region signature. 94 122 IPR017441 GO:0005524
Gma03g01679 428 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01679 Gma-Chr3 42911232 42914300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01679 1 384 Glycoside Hydrolase AT3G07070 41.388 1.62e-90 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma03g01679 PK_Tyr_Ser-Thr 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01679 - - gmx:100790026 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01679 03 42911232 42914300 Gma03g01679 03 42911232 42914300 ECH
Gma19g01727 19 46576215 46580568 Gma03g01679 03 42911232 42914300 GST
Gma03g01679 03 42911232 42914300 Gma10g00523 10 5327969 5330889 PCT
Gma03g01679 03 42911232 42914300 Gma13g01235 13 26632699 26636753 PCT