Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01674 ATGTTTTTGTGTTTCTTTATTTGTTTAAAATGGACTCAGGCATTAGTAATTGAGACATTTTTTTGTTGTTGTTTGTTGCTTTTGTTTATTAATGTGAAACTATATTTTAGATCTTGCTCTGGAAAAGGATGTCAAAGGAGGTACCATCCCTCTTGTGTGGATCCTCCTCTCAATTACATTCCTTTGGGGTTTTGGCATTGTATCTGGTGCACTAAGAAAAAGATGGAGCTTGGTGTGCATTCCGTTTCTAAAGGAGTGAAATCCATTTTGGATTCTAGAGAAGTGGTTTCAAAAAATAAAGTGATGCAAAGGGAGTACTTTGTCACGTATCATGGTCTTGCTCATGCTCACAACCGCTGGATTCCAGAATCAAAATTGCTTCTCGAGGCTCCTAAGCTCTTGGCCAAGTTTAAGAGGAAACTGCAGGTTACCACCAGGTGGAAAAGAGATTGGAGTATACCCCACCGTTTGCTGCTAAAAAGGGAAATTGTATTTTCAAAACAAAATGATCAACATTTTGATGGGCATGGTGACAATGGTTCAAATTGCCGTTATGAGTGGCTTGTCAAATGGAGGGGTCTTGGTTATGATAATGCTACTTGGGAGTTAGATGATGCTTCATTTTTGACGTCACCTGAAGGCAGGAAAGTCATAGATGATTACGAAAGTCGTCGCAAGAGAGCAGAGAGACTGTCAAAAAATCATTTTGAAGCTAATGAGGAGAGAAAAGCTTCCTTTTCTGAATTATCAGTGTTGCCAACTGGAGATTCGCCAGGATTTTATAACCAGCATTTGACTTATGTGAACAAGCTTCGCATGTGTTGGCACAAAGGTCAGAGTGCTCTTATTGTAGATGATCAAATTGACCAGGAGCGGGTTATGAAGGTGATTTTGTTTATATTATCTTTGAATTGTAATGTGAGGAGGCCTTTTCTCATCATCTCAACTTCTGCTGCCCTCTCTGTATGGGAAACAGAGTTCTTACGTTTGGCACCATCTGCCAATCTTGTAGTTTACAAGGGAGACAGAGATGCACGGAGTAGCATCAGGGCATTAGAGTTTTTTAATGAACATGGTGGAATATTATTTCAAATACTGTTATCATCTTCTCATATTATTGTTAAGGACTTGCATGAACTAAGATGCATTACATGGGAAGCAATAATAATTGATGAATGCCAGCAATCCAGAATTTCAGGACACTTGGACGATATCAAGATTCTAAAAGCTGAAATGAGACTCCTTCTTGTTAGTGGACAAATCAAGGAAGATCAAGCTGATTATATCAAACTGCTTTCATTACTCAAGTCCGGACAGCATGGATCAAGTATTGCTCAAGTGGAAACTTATTTCTCTGCTTCTTCTACCATTTCCAATTTGAAGAGTCAATTGGAAAAATATGTTGTATTCAAATGCAAATCTGGCTCCACTAGGTTTGTAGAGTATTGGGTTCCAGCCTGCCTTTCCCATTTGCAGCTTGAGCAGTATTGTTCAATGCTGCTTTCAAACTTAATGTTGTTATGCTCAGGCCAAAAGTCCGACTCAGTTGATGCCCTCCATGACCTTATTATCTCAATAAGGAAGTGCTGTGACCACCCTTATCTCCTGAACCCGGAACTGCAAAGTTTTGTTACTAAAGGTCTACCTGATGAAGAGCGTTTAAATATTGGTATACAAGCAAGTGGAAAACTGCAACTCCTTGAAAAAATCCTTTTGGAAGCAAGAAGTCGTGGGTTAAGGGTGTTAATATTATTTCAGTCAACTTGTGGCTCTGGATCAATTGGAGATATTTTGGATGATGTTCTCTGTCAGAGATTTGGTAAGGATTGCTATGTACGATATGATAGAGGTTATACCCCAAAATCAAAGCAAGCTGCTTTAGACACATTTAATGATGGAGAAAGTGGAAAATTTGTCTTCTTGATGGAAAACCGTGCCTGTCTCTCTAGTGTTAAGCTTTCTTCAGTGGACACTGTTATATTGTTTGACAGTGATTTGGAACCACAAAATGACCTAAGAGGCTTACAAAGGATGTCTATCAGCTCACAGTTTAAACAGATTACTGTTTTCAGATTGTACTCATTTTTCACTGTTGAAGAAAAAATTTTAATGCTTGCAAAAGAGGGTATAGCTCTTGACAGCAATGTGCGATTGCTTAGCCAGAGTATTTGTCCCACCCTGCTAAAATGGGGTGCCTCCTATTTGTTCAATAAGCTTGATGATTTGCATGCCAGTGTTGTTTCTACTCCAGACACTGTAGATATGTCACTTCTATGTGATACAACCTCTGAATTATCATCCCAATTGGTTTGTGGTGCTGATGATACTGATTGTCATGGATGGTCATTCATATCAAGAATACAGCAGAATGGAGGGGAATATGCGAGGGATGTTTTATTGCCAGGAGAAAGAATAATGAAATCTGGCGGTGAGCCATGTGGTTTTTCCTGGAGTGATCTTGAAGGAAGGCATCCTAAATGGAAATTTTTGCCTGTTTCATCTCAGAGGATCAGGAACACAGTCAAACATTTTGATTACGGACTAAGAGAATCTGAATGTGAAAAATACACCTTTATAGAAAAGAGGACAGCGTCGaaggataatgttgatcccaagaggagaaaagtgtccaaggataatgctgatcctgagtggagcaaatggaccatgaataaagttgatcccaagaggagaaaggtgtccaaTGATGTTGTTGATTCTAAAGGAAGGGAAGCGTCCAGGAATATTGTTGATTCCAAATATTGGAAAACAAGGTTGAAGAGCAAGAAGAATACAAGTGTTGTCAATAGAGCAAATAAATCAAATGGGCATCCCTTGACCAATGAAACTACGGGAAAAATTGCAACGAACATGCAATTTTCAGAGAAAAAGAACCCGCCTGACATACGAAATTTGCCAAAGCCAGATATATCAGGTCTTTGCGACATTCTACGTTTTTCGAAAAAAGTCAAGGCTGTCGCCATGAGGATTCTTGAGCACATATTCAAACATTACAATGTTAATTGCCAAGAAGTTTCTACTGTACAGGCTTTTGAAATATCTGTGTGTTGGCTAGCAGCTTGTTTGTTGGAACATGAGATTGATATGAAAGATTCACTTGCTCTAGCAAAACTGTACTTGAACTTCGATTGCAAGGAAGAGGAAGCCACCGATGTTTACTCAGAACTGTGGAAGCATGTGAAGGATTTTTCTAATTGTGTACAAAATGGACTTTGCGTCGAGAAATGCAATAGAAGTGGTGCTTCAGACTCCAACATGCCTGAGCTGAATGATTTGGCAGAGGAGGAGAAGCAGAAGGATTTTCTGGGTACTTGTGTTTCAAAACTTGTGAAATCTGTCACAAATGAACTCAATCTTCAAATGAAATCTCCCACAACAGTGGTTTCACAAGACCTGAGTTGTACTCATGAAATTTGTTTATCTCCAAATACACCTGGTAGTTTTCCTGTGGAAGGAGATGCTATCTCCATGGAATCTGGCTCAGAAGATGACAGAGTGAACGCTATAACATTAATAACTGCAGAAGATTCATCCGTTGATCACGGGAGTAATGATGTCAACCCTGTTACTGGTTCTTTGGAAAGACAGAGCCCTATTAGAAGTACAGATATTACACAATCTGATGGCAATGTTTTTGAAGATCCTCAAATTTTAGTGAATAAAGTGGTTGCTATTGACAATGGTATGAATATGTCTACTCATTCTGCGCAGCTTGACAGTGTTGAGGCAGATGCTGGAACTTCTGCTAGTACTGCTGTTCCTGAGGTCAGACGGTGGTACAGTGTAATGAGTCCTGTATGTGATGAGTCAACTGCTCTGAAGTTTCCTGAGACTACCTTACCATATATGCAACCATCGGATTCAAATTTGTGGCCATTGCCTCAGATGGCAATGTCTGCTATTCCATCTTTTCCGGAGAACAATGCGGCTAGTACAGTCATGCCTCTAGATGATATTTTTCGTCATAGTGGTGAGGATCATCGCTATATTCATGAGGCTGAAGTAATATTGGAAGCACCAAAGGACCTTAACTCTTCCTTTGTTTCACCTGTGATACCGCAACCCTTCACTAGTGTGCCCATGAATGAAAATGCGACACATGCACCTCACGGCATTACTATTCCTGGATTTATGAACAGTGATTACTCTGAAGCTCACTCTGTGACATCTGAAGTGTCCCACCTTGCCTACACAGACCCACTACTGGGTGAAATGTCGATAATAGAAAACATGAATGAAGAAGCTTTCATAGATCTACTACCAATAGAAATGGAGAGAATTGAAAAGGAGAAAGAAGAAGCCTTCAAGATACATGAGCAAAAGATATTGCAGCTCCAATCTGACTATGAAAAGGAGGTTGAAAAGTTAAGTGTAAAGTACAAGATGTTGCTTCAGAATGTTAATACTGAAGTAGCTCTAAAAAGAACGGAACTTGAGACACAATGTGAATTAGTGTTAAGGAACAAGGTATTAGCTCAAGTTTGGACCCATAATCTTGATAGTTGTGAAGGAGATGTTGTACAGTGCTCAGAACAAGAGGCAATGCCTAGTTCTCATAAGACTGCTCAAGACTAA 4596 0.386 MFLCFFICLKWTQALVIETFFCCCLLLLFINVKLYFRSCSGKGCQRRYHPSCVDPPLNYIPLGFWHCIWCTKKKMELGVHSVSKGVKSILDSREVVSKNKVMQREYFVTYHGLAHAHNRWIPESKLLLEAPKLLAKFKRKLQVTTRWKRDWSIPHRLLLKREIVFSKQNDQHFDGHGDNGSNCRYEWLVKWRGLGYDNATWELDDASFLTSPEGRKVIDDYESRRKRAERLSKNHFEANEERKASFSELSVLPTGDSPGFYNQHLTYVNKLRMCWHKGQSALIVDDQIDQERVMKVILFILSLNCNVRRPFLIISTSAALSVWETEFLRLAPSANLVVYKGDRDARSSIRALEFFNEHGGILFQILLSSSHIIVKDLHELRCITWEAIIIDECQQSRISGHLDDIKILKAEMRLLLVSGQIKEDQADYIKLLSLLKSGQHGSSIAQVETYFSASSTISNLKSQLEKYVVFKCKSGSTRFVEYWVPACLSHLQLEQYCSMLLSNLMLLCSGQKSDSVDALHDLIISIRKCCDHPYLLNPELQSFVTKGLPDEERLNIGIQASGKLQLLEKILLEARSRGLRVLILFQSTCGSGSIGDILDDVLCQRFGKDCYVRYDRGYTPKSKQAALDTFNDGESGKFVFLMENRACLSSVKLSSVDTVILFDSDLEPQNDLRGLQRMSISSQFKQITVFRLYSFFTVEEKILMLAKEGIALDSNVRLLSQSICPTLLKWGASYLFNKLDDLHASVVSTPDTVDMSLLCDTTSELSSQLVCGADDTDCHGWSFISRIQQNGGEYARDVLLPGERIMKSGGEPCGFSWSDLEGRHPKWKFLPVSSQRIRNTVKHFDYGLRESECEKYTFIEKRTASKDNVDPKRRKVSKDNADPEWSKWTMNKVDPKRRKVSNDVVDSKGREASRNIVDSKYWKTRLKSKKNTSVVNRANKSNGHPLTNETTGKIATNMQFSEKKNPPDIRNLPKPDISGLCDILRFSKKVKAVAMRILEHIFKHYNVNCQEVSTVQAFEISVCWLAACLLEHEIDMKDSLALAKLYLNFDCKEEEATDVYSELWKHVKDFSNCVQNGLCVEKCNRSGASDSNMPELNDLAEEEKQKDFLGTCVSKLVKSVTNELNLQMKSPTTVVSQDLSCTHEICLSPNTPGSFPVEGDAISMESGSEDDRVNAITLITAEDSSVDHGSNDVNPVTGSLERQSPIRSTDITQSDGNVFEDPQILVNKVVAIDNGMNMSTHSAQLDSVEADAGTSASTAVPEVRRWYSVMSPVCDESTALKFPETTLPYMQPSDSNLWPLPQMAMSAIPSFPENNAASTVMPLDDIFRHSGEDHRYIHEAEVILEAPKDLNSSFVSPVIPQPFTSVPMNENATHAPHGITIPGFMNSDYSEAHSVTSEVSHLAYTDPLLGEMSIIENMNEEAFIDLLPIEMERIEKEKEEAFKIHEQKILQLQSDYEKEVEKLSVKYKMLLQNVNTEVALKRTELETQCELVLRNKVLAQVWTHNLDSCEGDVVQCSEQEAMPSSHKTAQD 1531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01674 1531 Gene3D - 85 141 - -
Gma03g01674 1531 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 1185 1522 - -
Gma03g01674 1531 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 32 1092 - -
Gma03g01674 1531 Gene3D - 263 478 IPR038718 -
Gma03g01674 1531 Coils Coil 1453 1473 - -
Gma03g01674 1531 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 1185 1522 - -
Gma03g01674 1531 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 32 1092 - -
Gma03g01674 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 480 716 IPR027417 -
Gma03g01674 1531 MobiDBLite consensus disorder prediction 865 909 - -
Gma03g01674 1531 Gene3D - 479 713 IPR027417 -
Gma03g01674 1531 Gene3D - 142 224 - -
Gma03g01674 1531 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 566 731 IPR001650 -
Gma03g01674 1531 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 79 IPR013083 -
Gma03g01674 1531 SMART chromo_7 150 226 IPR000953 -
Gma03g01674 1531 SMART chromo_7 83 142 IPR000953 -
Gma03g01674 1531 Pfam Chromo (CHRromatin Organisation MOdifier) domain 86 140 IPR023780 -
Gma03g01674 1531 Pfam SNF2-related domain 293 535 IPR000330 GO:0005524|GO:0140658
Gma03g01674 1531 SMART PHD_3 21 71 IPR001965 -
Gma03g01674 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 298 441 IPR027417 -
Gma03g01674 1531 SUPERFAMILY Chromo domain-like 43 148 IPR016197 -
Gma03g01674 1531 SUPERFAMILY Chromo domain-like 152 224 IPR016197 -
Gma03g01674 1531 MobiDBLite consensus disorder prediction 1185 1215 - -
Gma03g01674 1531 MobiDBLite consensus disorder prediction 865 882 - -
Gma03g01674 1531 CDD SF2_C_SNF 548 692 - -
Gma03g01674 1531 ProSiteProfiles Chromo and chromo shadow domain profile. 159 233 IPR000953 -
Gma03g01674 1531 MobiDBLite consensus disorder prediction 889 909 - -
Gma03g01674 1531 Gene3D - 1423 1504 - -
Gma03g01674 1531 ProSiteProfiles Chromo and chromo shadow domain profile. 84 149 IPR000953 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01674 Gma-Chr3 42851482 42867309 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Gma03g01674 SNF2_N 8.1e-09 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01674 - K11643 gmx:100813574 2893.6