Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01673 ATGGAAGCAACTAATGGCCACCAAAACGGTTCATTTTGCTTGTCCACTGCCAAGGGAAGTAGTGATCCCTTGAACTGGGGAGCGGCGGCGGAGGCGATGAAGGGGAGTCACCTGGACGAGGTGAAGCGCATGGTGGCCGAGTACCGCAAGCCGGTGGTCCGGCTCGGCGGAGAGACTCTCACCATCGCTCAGGTGGCCGCCGTGGCCGGACACGACCACGGCGTGGCGGTGGAGCTCTCAGAGTCAGCGAGAGAAGGAGTAAAGGCGAGCAGTGAGTGGGTGATGAACAGCATGAACAACGGCACTGACAGTTACGGCGTCACCACCGGCTTCGGTGCCACGTCACACCGCCGAACCAAACAGGGTGGTGCTCTGCAGAAGGAACTCATCAGATTCTTAAACGCTGGAATATTTGGAAATGGAACTGAATCAAGCCATACCCTGCCACACACTGCAACCAGAGCAGCCATGTTAGTGAGAATCAACACTCTTCTTCAGGGGTACTCAGGCATTAGATTTGAAATCTTAGAAGCCATCACCAAGCTCCTGAACAACAACGTTACCCCATGTTTGCCACTTCGTGGTACAATCACAGCTTCTGGAGATCTTGTTCCACTTTCTTACATTGCTGGTTTGCTAACTGGCAGACCCAACTCCAAAGCTGTTGGACCTTCTGGAGAAGTACTTAACGCAAAAGAAGCTTTTGAATTGGCTAGCATCAACTCTGAGTTCTTTGAATTGCAACCCAAGGAAGGTCTTGCCCTTGTTAATGGCACTGCTGTTGGTTCTGGATTAGCTTCTATGGTACTCTTTGAGGCTAATATACTAGCTGTGTTGTCTGAAGTTCTATCAGCTATTTTTGCTGAAGTGATGCAGGGGAAACCTGAATTCACTGACCATTTGACACACAAGCTAAAGCACCATCCTGGTCAAATTGAGGCTGCTGCTATTATGGAGCATATCTTGGATGGAAGTTCCTACATGAAAGCTGCTAAGAAGTTGCATGAGATTGATCCCTTGCAAAAGCCAAAACAAGATAGATATGCCCTTAGAACTTCACCACAGTGGCTTGGTCCTCTTATTGAAGTGATTCGTTTCTCAACCAAGTCAATTGAGAGAGAGATCAACTCTGTGAATGACAACCCTTTGATTGATGTTTCAAGGAACAAGGCATTGCATGGTGGCAATTTCCAAGGAACCCCTATTGGAGTCTCTATGGACAACACACGTTTGGCACTTGCATCTATTGGCAAACTCATGTTTGCTCAATTCTCTGAGCTTGTCAATGACTTTTACAACAATGGATTGCCTTCAAATCTCACTGCTAGCAGAAATCCAAGCTTGGACTATGGTTTCAAGGGAGCTGAAATTGCCATGGCTTCTTACTGCTCTGAACTCCAATATCTTGCAAATCCAGTAACTACCCATGTCCAAAGTGCTGAGCAACACAACCAGGATGTCAACTCTTTGGGCTTGATCTCATCTAGAAAGACAAATGAAGCCATCGAGATCCTTAAGCTCATGTCTTCCACATTCTTGATTGCACTTTGCCAAGCAATTGACTTGAGGCATTTAGAGGAGAATTTGAAAAACTCGGTCAAGAACACCGTGAGCCAAGTTTCCAAAAGGATTCTTACCACAGGTGTCAATGGAGAACTCCATCCTTCAAGATTTTGTGAGAAGGATCTGCTAAAAGTGGTTGATAGGGAGTATATATTTTCCTACATTGATGACCCCTGCAGTGCTACATACCCATTGATGCAAAAACTTAGGCAAGTGCTTGTAGATCATGCATTGGTAAATGCAGAGAGTGAGAAGGATGTGAACTCGTCCATCTTTCAAAAGATAGCAATCTTTGAGGAAGAGTTGAAGAATCTCTTGCCAAAAGAGGTTGAAGGTGCAAGGGCTGCTTATGAGAGTGGCAAAGCTGCAATTCCAAACAAGATCCAAGAATGCAGATCTTACCCACTGTACAAGTTTGTGAGAGAGGAATTAGGGACTGGGTTGCTAACTGGAGAAAAGGTGAGGTCACCGGGTGAAGAGTTTGACAAATTATTCACAGCAATGTGCCAAGGGAAAATTATTGATCCTCTTATGGAGTGCCTTGGGGAGTGGAATGGAGCTCCTCTTCCAATCTCTTAA 2142 0.4613 MEATNGHQNGSFCLSTAKGSSDPLNWGAAAEAMKGSHLDEVKRMVAEYRKPVVRLGGETLTIAQVAAVAGHDHGVAVELSESAREGVKASSEWVMNSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESSHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEVLNAKEAFELASINSEFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVSKRILTTGVNGELHPSRFCEKDLLKVVDREYIFSYIDDPCSATYPLMQKLRQVLVDHALVNAESEKDVNSSIFQKIAIFEEELKNLLPKEVEGARAAYESGKAAIPNKIQECRSYPLYKFVREELGTGLLTGEKVRSPGEEFDKLFTAMCQGKIIDPLMECLGEWNGAPLPIS 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01673 713 CDD PAL-HAL 58 523 IPR001106 -
Gma03g01673 713 Gene3D - 13 259 IPR024083 -
Gma03g01673 713 Gene3D Fumarase/aspartase (Central domain) 260 708 - -
Gma03g01673 713 Pfam Aromatic amino acid lyase 60 536 IPR001106 -
Gma03g01673 713 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 22 702 IPR005922 GO:0005737|GO:0006559|GO:0016841
Gma03g01673 713 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 195 211 IPR022313 GO:0016841
Gma03g01673 713 Gene3D - 526 647 IPR023144 -
Gma03g01673 713 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 17 712 - -
Gma03g01673 713 SUPERFAMILY L-aspartase-like 22 712 IPR008948 GO:0003824
Gma03g01673 713 PANTHER HISTIDINE AMMONIA-LYASE 17 712 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01673 Gma-Chr3 42844985 42848878 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01673 20 712 Monolignol Biosynthesis Gene Families AT2G37040 84.416 0.0 1251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01673 K10775 - gmx:100788438 1395.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01673 03 42844985 42848878 Gma20g01696 20 44152043 44158063 ECH
Gma03g01673 03 42844985 42848878 Gma03g01672 03 42833250 42836336 ECH
Gma03g01673 03 42844985 42848878 Gma03g01673 03 42844985 42848878 ECH
Gma19g01721 19 46527255 46531217 Gma03g01673 03 42844985 42848878 GST
Gma03g01673 03 42844985 42848878 Gma10g00529 10 5397352 5401828 PCT
Gma03g01673 03 42844985 42848878 Gma13g01241 13 26689587 26694407 PCT