Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01667 ATGGCGAAAGACATCGAAACTGAGGTCCAAAGTGGGCTGCCACACAAGGACTACCACGACCCACCCGCCGCCGCATTCTACGACCCCGCCGAGCTCCGCAAGTGGTCCTTCTACCGCGCCCTCATCGCCGAGTTTGTCGCCACTCTCCTCTTCCTCTACGTCACCATCCTCACCGTCATCGGCTACAATCACCAGACCGCCACCGGCAGCCCCGACCTCTGCAATGGCGTCGGCGTCCTCGGCATCGCTTGGGCCTTCGGAGGCATGATATTTGTCCTTGTCTATTGCACTGCTGGGATATCAGGGGGACACATAAACCCGGCGGTGACGTTTGGGTTGTTTCTGGCGAGGAAGGTGTCGCTTATAAGAGCAGTTGGGTACATGGTGGCTCAGGTGTTGGGGGCCATAAGTGGTGTGGGGCTAGTGAAGGCTTTACAGAAGAGCTACTACAACAGGTACAATGGTGGCGTGAACATGCTCGCTGATGGGTACAGCAAAGGAACCGGTTTGGGAGCTGAGATTATTGGCACATTTATTCTTGTCTACACCGTCTTCTCTGCTACCGATCCCAAGAGAGTGGCAAGAGACTCCCATGTTCCCGTGTTGGCACCACTTCCAATTGGGTTTGCGGTGTTCATAGTTCACCTGGCCACCATCCCTATCACCGGCACTGGCATCAACCCAGCCAGAAGCCTAGGGCCTGCTGTCATATTCAACAACGAGAAGGCATGGGATGACCAGTGGATCTTCTGGGTTGGACCCTTCATCGGTGCTGCCATTGCTGCATTCTACCACCAGTCCGTGCTGAGGGCCCAAGCAGCAAAGGCTCTCGGGTCTTTCAGGAGCTCCTCAAACCTGGGGTGTGGTCCTGTGCTGATATTTCTATGGGACTTAAGCACCCGATTGCTACGAATGGCATCCAACAGGGGTCAAGGTGGAATTCAACAGTTGCTGGCTGCTGAACAAGAAGCGCAAAGAATTGTCAATGCTGCAAAAAATGAAAAATTGGCTAGACTGAAGCAAGCCAAAGAAGAGGCTGAAAAGGAAATTGCCGAGTATAGGGCTCAGTTGGAGTACGAGTTTCAAAAGAAAGTGTCACAGAGTAGTGGAGATTCTGGTGCTAATGTGAAGAGACTTGAGCAAGAGACAGAAGAAAAGATTCATCACCTGAAAACTGAGGCTGAGAGGATATCAGGGGATGTTGTCTCCATGCTCCTCAAGCATGTAACAAGTGTGAAGAATTAG 1245 0.5245 MAKDIETEVQSGLPHKDYHDPPAAAFYDPAELRKWSFYRALIAEFVATLLFLYVTILTVIGYNHQTATGSPDLCNGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVGYMVAQVLGAISGVGLVKALQKSYYNRYNGGVNMLADGYSKGTGLGAEIIGTFILVYTVFSATDPKRVARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGPAVIFNNEKAWDDQWIFWVGPFIGAAIAAFYHQSVLRAQAAKALGSFRSSSNLGCGPVLIFLWDLSTRLLRMASNRGQGGIQQLLAAEQEAQRIVNAAKNEKLARLKQAKEEAEKEIAEYRAQLEYEFQKKVSQSSGDSGANVKRLEQETEEKIHHLKTEAERISGDVVSMLLKHVTSVKN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01667 414 CDD MIP 39 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma03g01667 414 Coils Coil 314 363 - -
Gma03g01667 414 PANTHER AQUAPORIN PIP2-4-RELATED 1 283 - -
Gma03g01667 414 Pfam Major intrinsic protein 31 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma03g01667 414 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 310 413 IPR005124 GO:0016471|GO:0046961|GO:1902600
Gma03g01667 414 SUPERFAMILY Aquaporin-like 31 270 IPR023271 -
Gma03g01667 414 ProSitePatterns MIP family signature. 104 112 IPR022357 -
Gma03g01667 414 Gene3D - 305 414 - -
Gma03g01667 414 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 283 IPR034294 -
Gma03g01667 414 TIGRFAM MIP: MIP family channel proteins 43 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma03g01667 414 Gene3D Glycerol uptake facilitator protein. 25 286 IPR023271 -
Gma03g01667 414 PRINTS Major intrinsic protein family signature 208 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma03g01667 414 PRINTS Major intrinsic protein family signature 172 190 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma03g01667 414 PRINTS Major intrinsic protein family signature 86 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma03g01667 414 PRINTS Major intrinsic protein family signature 123 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma03g01667 414 PRINTS Major intrinsic protein family signature 248 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma03g01667 414 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma03g01667 414 Pfam Vacuolar (H+)-ATPase G subunit 311 413 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01667 Gma-Chr3 42741873 42749306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01667 1 286 Major Intrinsic Protein MIP AT3G53420 77.003 1.29e-161 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01667 K09872 - gmx:100785783 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01667 03 42741873 42749306 Gma03g01667 03 42741873 42749306 ECH
Gma19g01713 19 46413183 46415651 Gma03g01667 03 42741873 42749306 GST