Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01666 ATGAAGAATTCGTGTTCTTTTTGTACTTGTTTCTCAGCATCTGTCAAAGAACAAACCAAGCACGAGGAGCCAGATGAAGATAACAATGATGGCAGCTTCCGCATATTCACTTATAGAGAATTGAATTCTGCCACACGAGGTTTTCACCCCTCGGAAAAGATTGGAGAAGGAGGTTTTGGCACTGTCTACAAGGGGCAGCTTCGGGATGGAACTTTTGTGGCCGTGAAAGTGCTTTCGATTGAGCTAGATTCCTTGAGAGGAGAGAGGGAGTTTGTGGCAGAATTGAATACACTAGCAAATGTCAAGCACCAAAATCTTGTCATTCTCCGAGGGTGTTGTGTAGAAGGAGGCCACAGATACATAGTCTACGACTACATGGAAAACAATAGCCTTCGCCACACTTTCTTAGGTTCAGAGCAAAAAAAGATGAATTTCAGCTGGGAAACTCGGAGGGatgtatccataggtgtggcaagtgggcttgcctttctccacgaggaacatcaaccccatattgtgcatagagatatcaaatccagcaatgttcttcttgatcgaaattttacaccaaaagtctccgattttggcttggccaagctactaagagatgaAAAGTCCCACGTCACTACCCATGTTGCTGGCACATTCGGTTATCTTGCACCAGACTATGCTAGTTCTGGACACttgacacgaaaatcagatgtttatagctttggagttctacttttagaaattgtcagtggccaacGCGTGGTAGATTCGTCTCAAAACGGGGAGCGTTTCATAGTTGAGAAGGCTTGGGCAGCATATGAGGCTAATGATCTTCTGAGAATGGTGGATCCCGTGCTGAATAAGAACTATCCCGTGGAAGAAGCGAAACGGTTCCTAATGGTGGGGCTGCGTTGCGTGCAACAAATGGCGAGGCTTAGGCCACGAATGCCAGAGGTTGTGGACATGCTGACCAACAATGTTGAGACGGTAGAGTTTAGTGTTTCACAACCAGGATTTGTCGCTGATCTCAGCAGCGCCAGAATAAGGAAGCAAATGAATCCATCAGAAGAATCAAGTGCTACTGCAGCAACCTTTGCAGACTCCTCTGGATGGTGTACCACCAATCTTGTCCGTTAG 1128 0.3759 MKNSCSFCTCFSASVKEQTKHEEPDEDNNDGSFRIFTYRELNSATRGFHPSEKIGEGGFGTVYKGQLRDGTFVAVKVLSIELDSLRGEREFVAELNTLANVKHQNLVILRGCCVEGGHRYIVYDYMENNSLRHTFLGSEQKKMNFSWETRRDVSIGVASGLAFLHEEHQPHIVHRDIKSSNVLLDRNFTPKVSDFGLAKLLRDEKSHVTTHVAGTFGYLAPDYASSGHLTRKSDVYSFGVLLLEIVSGQRVVDSSQNGERFIVEKAWAAYEANDLLRMVDPVLNKNYPVEEAKRFLMVGLRCVQQMARLRPRMPEVVDMLTNNVETVEFSVSQPGFVADLSSARIRKQMNPSEESSATAATFADSSGWCTTNLVR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01666 375 Gene3D Phosphorylase Kinase; domain 1 9 125 - -
Gma03g01666 375 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 344 - -
Gma03g01666 375 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Gma03g01666 375 SUPERFAMILY Protein kinase-like (PK-like) 30 339 IPR011009 -
Gma03g01666 375 ProSiteProfiles Protein kinase domain profile. 48 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01666 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Gma03g01666 375 Pfam Protein kinase domain 49 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01666 375 Gene3D Transferase(Phosphotransferase) domain 1 126 333 - -
Gma03g01666 375 SMART serkin_6 48 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01666 375 PANTHER RECEPTOR-LIKE KINASE 9 344 - -
Gma03g01666 375 CDD STKc_IRAK 54 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01666 Gma-Chr3 42730588 42732718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01666 36 339 Receptor kinase-like Gene Family AT1G56120 49.836 6.70e-95 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma03g01666 Pkinase 5.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01666 - - gmx:100785251 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01666 03 42730588 42732718 Gma03g01666 03 42730588 42732718 ECH
Gma19g01712 19 46399384 46401492 Gma03g01666 03 42730588 42732718 GST